Factsheet for Os06t0604500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 3
plastid 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88619	Sorghum	cytosol, plastid	92.04	91.51
TraesCS7B01G278000.1	Wheat	cytosol, plastid	88.74	88.74
TraesCS7A01G376600.1	Wheat	cytosol, plastid	89.51	88.65
TraesCS7D01G372900.1	Wheat	cytosol, plastid	89.13	88.44
HORVU7Hr1G090020.9	Barley	mitochondrion	89.13	87.76
Zm00001d046509_P002	Maize	plastid	90.1	84.06
PGSC0003DMT400074454	Potato	plastid	27.38	78.77
GSMUA_AchrUn_...	Banana	cytosol	75.53	75.68
KRH41046	Soybean	cytosol	71.84	75.2
KRH59718	Soybean	cytosol	72.23	74.4
GSMUA_Achr8P26070_001	Banana	cytosol	74.17	74.17
VIT_14s0068g00890.t01	Wine grape	cytosol	70.29	74.03
KRG94737	Soybean	cytosol	68.54	74.0
Os02t0201500-00	Rice	plastid	83.11	73.79
GSMUA_Achr5P05990_001	Banana	cytosol	73.4	73.54
KRH63894	Soybean	cytosol	66.8	73.5
KRH06795	Soybean	cytosol	66.8	72.73
KRH54061	Soybean	cytosol	66.8	72.27
Solyc06g068720.2.1	Tomato	cytosol	69.9	72.0
PGSC0003DMT400036927	Potato	cytosol	68.35	71.98
CDY14050	Canola	cytosol	65.05	71.58
CDX70028	Canola	cytosol	54.95	71.28
KRH70079	Soybean	cytosol	66.8	71.22
CDY55175	Canola	cytosol	64.47	70.94
Bra028702.1-P	Field mustard	cytosol	64.47	70.94
Solyc03g118090.2.1	Tomato	cytosol	69.13	70.92
AT5G51050.1	Thale cress	cytosol	68.54	70.88
Bra009271.1-P	Field mustard	cytosol	58.84	70.3
AT5G07320.1	Thale cress	cytosol	65.24	70.15
Bra035722.1-P	Field mustard	cytosol	67.18	69.34
CDY05832	Canola	cytosol	67.18	69.2
CDX71683	Canola	cytosol	66.99	69.0
CDY00231	Canola	cytosol	62.72	67.71
Bra019615.1-P	Field mustard	cytosol	62.52	67.51
CDX86953	Canola	cytosol	62.52	67.51
VIT_17s0000g00030.t01	Wine grape	plastid	71.65	67.34
AT5G61810.1	Thale cress	cytosol	61.36	66.11
CDX98981	Canola	endoplasmic reticulum, golgi	53.4	64.55
Os01t0143100-01	Rice	mitochondrion	22.14	35.4
Os05t0585900-01	Rice	cytosol, mitochondrion	23.88	34.65
Os03t0267700-01	Rice	cytosol	22.72	33.81
Os01t0708900-01	Rice	cytosol, extracellular, peroxisome	19.42	29.67
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	18.64	28.24
Os05t0171300-01	Rice	mitochondrion, plastid	21.94	27.23
Os01t0934200-01	Rice	cytosol	16.89	25.89
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	17.48	25.21
Os06t0602700-01	Rice	plastid	20.19	24.59
Os02t0202400-01	Rice	plastid	20.19	24.47
Os01t0265200-01	Rice	plastid	17.67	23.88
Os09t0497000-01	Rice	plastid	17.09	22.51
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	18.25	22.33
Os08t0520000-01	Rice	cytosol	16.12	21.56

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:4341470	EMBL:AK070190	EMBL:AK072098
ProteinID:BAD35532.1	ProteinID:BAF19932.1	ProteinID:BAS98518.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0015217	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR002048	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	EnsemblPlantsGene:Os06g0604500	EnsemblPlants:Os06t0604500-01	PFAM:PF00153	PFAM:PF13499
PRINTS:PR00926	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF454
UniProt:Q69X19	SMART:SM00054	SUPFAM:SSF103506	SUPFAM:SSF47473	UniParc:UPI0000403814	RefSeq:XP_015644178.1
SEG:seg	:	:	:	:	:

Description

EF-Hand type domain containing protein. (Os06t0604500-01);Hypothetical conserved gene. (Os06t0604500-02)

Coordinates

chr6:+:23935983..23940521

Molecular Weight (calculated)

56436.8 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.065

Length

515 amino acids

Sequence
(BLAST)

001: MPGAAVHAVD PRGGASPPPV AKAEAATAAA AAAGGCEPAR KAGAVTMEHV LLALHETEAE REARIREMFA FFDVDGRGQL DYAQIEAGLA ALQIPAECKY
101: ARELLRACDR DRDGRVGYDD FRRYMDDKEL ELYRIFQAID VEHNGCILPE ELWDALVKAG IEIDDEELAR FVEHVDKDNN GIITFEEWRD FLLLYPNEVT
201: IENIYHHWER VCLVDIGEQA VIPEGISKSV NASKYLIAGG IAGAASRTAT APLDRLKVIM QVQTTRTTVM HSIKDIWSQG GMLAFFRGNG LNVVKVAPES
301: AIRFYAYEML KEYIMKSKGE NKSEVGPSER LVAGGLAGAV AQTAIYPVDL VKTRLQTYSC VDGKVPSLGA LSRDILMHEG PRAFYRGLVP SLLGIVPYAG
401: IDLAVYETLK DVSKTYILKD SDPGPLVQLG CGTVSGALGA TCVYPLQVIR TRLQAQRANS ESAYRGMSDV FWRTLQHEGV SGFYKGILPN LLKVVPAASI
501: TYLVYEAMKK NLSLD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.