Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G049720.4 | Barley | cytosol, peroxisome, plastid | 92.35 | 92.63 |
| TraesCS3D01G209300.1 | Wheat | plastid | 92.06 | 92.33 |
| TraesCS3A01G206300.1 | Wheat | plastid | 91.76 | 92.04 |
| EES00940 | Sorghum | plastid | 91.76 | 91.76 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 62.94 | 90.3 |
| Zm00001d011226_P002 | Maize | plastid | 90.29 | 90.29 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 77.06 | 77.51 |
| Os01t0708900-01 | Rice | cytosol, extracellular, peroxisome | 73.24 | 73.89 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 71.47 | 70.64 |
| CDX84024 | Canola | cytosol | 66.76 | 69.0 |
| CDX96850 | Canola | cytosol | 67.06 | 68.88 |
| Bra016697.1-P | Field mustard | cytosol | 66.47 | 68.28 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 65.59 | 68.2 |
| AT1G14560.1 | Thale cress | cytosol | 65.88 | 67.67 |
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 65.0 | 67.58 |
| PGSC0003DMT400021172 | Potato | plastid | 66.76 | 67.56 |
| Solyc08g062860.2.1 | Tomato | cytosol | 67.65 | 67.06 |
| KRH61524 | Soybean | cytosol | 63.24 | 63.42 |
| KRH52207 | Soybean | cytosol | 62.35 | 62.72 |
| CDY67915 | Canola | cytosol | 42.65 | 57.54 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 46.76 | 44.54 |
| Os05t0585900-01 | Rice | cytosol, mitochondrion | 36.18 | 34.65 |
| Os01t0143100-01 | Rice | mitochondrion | 29.41 | 31.06 |
| Os03t0267700-01 | Rice | cytosol | 30.29 | 29.77 |
| Os01t0265200-01 | Rice | plastid | 29.41 | 26.25 |
| Os01t0934200-01 | Rice | cytosol | 25.59 | 25.89 |
| Os02t0202400-01 | Rice | plastid | 27.65 | 22.12 |
| Os05t0171300-01 | Rice | mitochondrion, plastid | 26.76 | 21.93 |
| Os03t0191100-01 | Rice | mitochondrion, peroxisome, plastid | 26.18 | 21.14 |
| Os09t0497000-01 | Rice | plastid | 23.82 | 20.72 |
| Os06t0602700-01 | Rice | plastid | 25.59 | 20.57 |
| Os08t0520000-01 | Rice | cytosol | 23.24 | 20.52 |
| Os06t0604500-01 | Rice | nucleus | 28.24 | 18.64 |
| Os02t0201500-00 | Rice | plastid | 28.53 | 16.72 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:4326348 | ProteinID:BAB90009.1 | ProteinID:BAS72787.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0015217 | GO:GO:0015228 |
| GO:GO:0015866 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035349 | GO:GO:0055085 | GO:GO:0080121 |
| GO:GO:0080122 | InterPro:Graves_DC | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | EnsemblPlantsGene:Os01g0571000 | EnsemblPlants:Os01t0571000-02 | PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00928 |
| PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF617 | UniProt:Q8S1A3 | SUPFAM:SSF103506 | UniParc:UPI00000A9E86 |
| RefSeq:XP_015621173.1 | SEG:seg | : | : | : | : |
Description
Mitochondrial carrier protein domain containing protein. (Os01t0571000-01);Similar to Grave disease carrier protein. (Os01t0571000-02)
Coordinates
chr1:+:21918189..21921550
Molecular Weight (calculated)
36936.9 Da
IEP (calculated)
10.124
GRAVY (calculated)
0.027
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSQESTFS SASTAAQVNA CALDLLPVYA KELIAGGAAG AFAKTAVAPL ERVKILLQTR THGFQSLGIL QSLRKLWQYE GIRGFYKGNG ASVLRIVPYA
101: ALHYMTYEQY RCWILNNFAP SVGTGPVVDL LAGSAAGGTA VLCTYPLDLA RTKLAYQVSN VGQPGNALGN AGRQPAYGGI KDVFKTVYKE GGARALYRGV
201: GPTLIGILPY AGLKFYIYED LKSRVPEDYK RSVVLKLSCG ALAGLFGQTL TYPLDVVRRQ MQVQNKQPHN ANDAFRIRGT FQGLALIIRC QGWRQLFAGL
301: SLNYVKVVPS VAIGFTTYDM MKNLLRVPPR ERLYQSSGNA
101: ALHYMTYEQY RCWILNNFAP SVGTGPVVDL LAGSAAGGTA VLCTYPLDLA RTKLAYQVSN VGQPGNALGN AGRQPAYGGI KDVFKTVYKE GGARALYRGV
201: GPTLIGILPY AGLKFYIYED LKSRVPEDYK RSVVLKLSCG ALAGLFGQTL TYPLDVVRRQ MQVQNKQPHN ANDAFRIRGT FQGLALIIRC QGWRQLFAGL
301: SLNYVKVVPS VAIGFTTYDM MKNLLRVPPR ERLYQSSGNA
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.