Factsheet for HORVU3Hr1G049720.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	69.03	98.73
TraesCS3D01G209300.1	Wheat	plastid	98.53	98.53
TraesCS3A01G206300.1	Wheat	plastid	98.23	98.23
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	92.63	92.35
EES00940	Sorghum	plastid	90.56	90.29
Zm00001d011226_P002	Maize	plastid	89.38	89.12
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	75.81	76.04
VIT_04s0008g01060.t01	Wine grape	cytosol	70.8	69.77
CDX84024	Canola	cytosol	66.08	68.09
CDX96850	Canola	cytosol	66.37	67.98
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	65.19	67.58
Bra016697.1-P	Field mustard	cytosol	65.78	67.37
AT1G14560.1	Thale cress	cytosol	65.78	67.37
PGSC0003DMT400021172	Potato	plastid	66.67	67.26
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.6	66.97
Solyc08g062860.2.1	Tomato	cytosol	66.67	65.89
KRH61524	Soybean	cytosol	63.72	63.72
KRH52207	Soybean	cytosol	62.83	63.02
HORVU3Hr1G066850.4	Barley	mitochondrion	61.95	60.87
CDY67915	Canola	cytosol	42.77	57.54
HORVU6Hr1G042080.7	Barley	cytosol	54.28	54.76
HORVU1Hr1G092860.1	Barley	cytosol	35.99	34.46
HORVU4Hr1G060540.1	Barley	cytosol	30.38	30.12
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	29.79	27.15
HORVU3Hr1G037170.3	Barley	plastid	30.97	24.76
HORVU5Hr1G074710.1	Barley	mitochondrion	23.01	24.68
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	26.55	21.79
HORVU3Hr1G098170.1	Barley	mitochondrion	24.19	21.58
HORVU4Hr1G078650.2	Barley	peroxisome	26.25	21.29
HORVU5Hr1G074670.1	Barley	mitochondrion	23.3	20.41
HORVU7Hr1G111040.2	Barley	cytosol	25.07	20.14
HORVU7Hr1G090020.9	Barley	mitochondrion	28.32	18.36

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:AK362866	UniProt:F2DG49	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU3Hr1G049720	EnsemblPlants:HORVU3Hr1G049720.4
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF617	SUPFAM:SSF103506	UniParc:UPI0002006336
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DG49]

Coordinates

chrchr3H:+:351327369..351330695

Molecular Weight (calculated)

37037.1 Da

IEP (calculated)

10.233

GRAVY (calculated)

0.012

Length

339 amino acids

Sequence
(BLAST)

001: MGSSQESTFS SASTAAQVNA LDLLPVYAKE LIAGGAAGAF AKTAVAPLER VKILLQTRTQ GFQSLGILQS LRKLWKYEGI RGFYKGNGAS VLRIVPYAAL
101: HYMTYEQYRC WILNNAPSVG TGPVVDLLAG SAAGGTAVLC TYPLDLARTK LAYQVSNVVQ PANSLGNFGR QPVYNGVKDV FKTVYKEGGV RSLYRGIGPT
201: LIGILPYAGL KFYIYEDLKS RVPEDYKRSV ILKLSCGALA GLFGQTLTYP LDVVRRQMQV QNKQPQNAND AFRIRGTFQG LFLIIRCQGW RQLFAGLSLN
301: YVKVVPSVAI GFTTYDMMKN LLGVPPREKA HPLTGNSNK

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.