Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G209300.1 | Wheat | plastid | 99.58 | 69.62 |
| TraesCS3A01G206300.1 | Wheat | plastid | 99.16 | 69.32 |
| HORVU3Hr1G049720.4 | Barley | cytosol, peroxisome, plastid | 98.73 | 69.03 |
| Os01t0571000-02 | Rice | cytosol, peroxisome, plastid | 90.3 | 62.94 |
| EES00940 | Sorghum | plastid | 87.76 | 61.18 |
| Zm00001d011226_P002 | Maize | plastid | 86.92 | 60.59 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 74.26 | 52.07 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 72.15 | 50.74 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 69.2 | 47.67 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 65.4 | 47.4 |
| CDX96850 | Canola | cytosol | 65.82 | 47.13 |
| CDX84024 | Canola | cytosol | 65.4 | 47.11 |
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 64.98 | 47.09 |
| Bra016697.1-P | Field mustard | cytosol | 65.4 | 46.83 |
| AT1G14560.1 | Thale cress | cytosol | 64.56 | 46.22 |
| PGSC0003DMT400021172 | Potato | plastid | 64.98 | 45.83 |
| Solyc08g062860.2.1 | Tomato | cytosol | 64.56 | 44.61 |
| CDY67915 | Canola | cytosol | 46.84 | 44.05 |
| KRH61524 | Soybean | cytosol | 62.03 | 43.36 |
| KRH52207 | Soybean | cytosol | 60.76 | 42.6 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 54.85 | 38.81 |
| TraesCS5B01G299100.1 | Wheat | plastid | 42.62 | 31.76 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 34.6 | 23.16 |
| TraesCS4B01G211000.1 | Wheat | plastid | 32.07 | 22.69 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 30.8 | 22.19 |
| TraesCS3B01G211500.1 | Wheat | golgi | 29.54 | 17.99 |
| TraesCS6B01G210000.1 | Wheat | plastid | 28.27 | 15.62 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 24.47 | 15.06 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 25.74 | 15.06 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 26.58 | 14.86 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 23.21 | 14.78 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 26.16 | 14.76 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 25.32 | 14.56 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 27.85 | 12.82 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G238400.1 | EnsemblPlantsGene:TraesCS3B01G238400 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF617 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SUPFAM:SSF103506 | TMHMM:TMhelix |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:373622870..373624947
Molecular Weight (calculated)
26176.9 Da
IEP (calculated)
10.093
GRAVY (calculated)
-0.061
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYEQYRCWI LNNAPSVGTG PVVDLLAGSA AGGTAVLCTY PLDLARTKLA YQVSNVAQPV NSLGNFGRQP VYNGVKDVFK TVYKEGGVRS LYRGIGPTLI
101: GILPYAGLKF YIYEDLKSRV PEDYKRSVIL KLSCGALAGL FGQTLTYPLD VVRRQMQVQN KQPQNANDAF RIRGTFQGLF LIIRCQGWRQ LFAGLSLNYV
201: KVVPSVAIGF TTYDMMKNLL GVPPREKAHP LTGNNNK
101: GILPYAGLKF YIYEDLKSRV PEDYKRSVIL KLSCGALAGL FGQTLTYPLD VVRRQMQVQN KQPQNANDAF RIRGTFQGLF LIIRCQGWRQ LFAGLSLNYV
201: KVVPSVAIGF TTYDMMKNLL GVPPREKAHP LTGNNNK
001: MTYEVYRDWI LEKNLPLGSG PIVDLVAGSA AGGTAVLCTY PLDLARTKLA YQVSDTRQSL RGGANGFYRQ PTYSGIKEVL AMAYKEGGPR GLYRGIGPTL
101: IGILPYAGLK FYIYEELKRH VPEEHQNSVR MHLPCGALAG LFGQTITYPL DVVRRQMQVE NLQPMTSEGN NKRYKNTFDG LNTIVRTQGW KQLFAGLSIN
201: YIKIVPSVAI GFTVYESMKS WMRIPPRERS KPA
101: IGILPYAGLK FYIYEELKRH VPEEHQNSVR MHLPCGALAG LFGQTITYPL DVVRRQMQVE NLQPMTSEGN NKRYKNTFDG LNTIVRTQGW KQLFAGLSIN
201: YIKIVPSVAI GFTVYESMKS WMRIPPRERS KPA
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.