Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 69.62 | 99.58 |
| TraesCS3A01G206300.1 | Wheat | plastid | 99.11 | 99.11 |
| HORVU3Hr1G049720.4 | Barley | cytosol, peroxisome, plastid | 98.53 | 98.53 |
| Os01t0571000-02 | Rice | cytosol, peroxisome, plastid | 92.33 | 92.06 |
| EES00940 | Sorghum | plastid | 90.27 | 90.0 |
| Zm00001d011226_P002 | Maize | plastid | 89.09 | 88.82 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 75.81 | 76.04 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 71.68 | 72.11 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 70.5 | 69.48 |
| CDX84024 | Canola | cytosol | 66.08 | 68.09 |
| CDX96850 | Canola | cytosol | 66.37 | 67.98 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 65.19 | 67.58 |
| AT1G14560.1 | Thale cress | cytosol | 65.78 | 67.37 |
| Bra016697.1-P | Field mustard | cytosol | 65.78 | 67.37 |
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 64.6 | 66.97 |
| PGSC0003DMT400021172 | Potato | plastid | 66.37 | 66.96 |
| Solyc08g062860.2.1 | Tomato | cytosol | 66.37 | 65.6 |
| KRH61524 | Soybean | cytosol | 63.13 | 63.13 |
| KRH52207 | Soybean | cytosol | 62.24 | 62.43 |
| CDY67915 | Canola | cytosol | 42.48 | 57.14 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 54.87 | 55.52 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 52.51 | 51.9 |
| TraesCS5D01G306500.1 | Wheat | plastid | 41.59 | 46.84 |
| TraesCS1D01G434000.1 | Wheat | cytosol | 35.99 | 34.46 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 29.2 | 30.09 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 30.09 | 29.74 |
| TraesCS3D01G186300.1 | Wheat | mitochondrion | 30.09 | 26.02 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 24.19 | 24.4 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 26.25 | 21.45 |
| TraesCS6D01G168200.1 | Wheat | golgi | 27.14 | 21.45 |
| TraesCS4D01G304600.1 | Wheat | peroxisome | 26.25 | 21.19 |
| TraesCS5D01G282200.1 | Wheat | cytosol | 23.3 | 20.63 |
| TraesCS7D01G250600.1 | Wheat | cytosol | 22.12 | 20.6 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 25.07 | 20.09 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 28.32 | 18.5 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G209300.1 | EnsemblPlantsGene:TraesCS3D01G209300 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF617 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:276747403..276750072
Molecular Weight (calculated)
36965.0 Da
IEP (calculated)
10.245
GRAVY (calculated)
0.021
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSQESTFS SASTAAQVNA LGLLPVYAKE LIAGGAAGAF AKTAVAPLER VKILLQTRTQ GFQSLGILQS LRKLWQYEGV RGFYKGNGAS VLRIVPYAAL
101: HYMTYEQYRC WILNNAPSVG TGPVVDLLAG SAAGGTAVLC TYPLDLARTK LAYQVSNVAQ PVNSLGNFGR QPVYNGVKDV FKTVYKEGGV RSLYRGIGPT
201: LIGILPYAGL KFYIYEDLKS RVPEDYKRSV ILKLSCGALA GLFGQTLTYP LDVVRRQMQV QNKQPQNAND AFRIRGTFQG LFLIIRCQGW RQLFAGLSLN
301: YVKVVPSVAI GFTTYDMMKN LLGVPPREKA HPLTGNSNK
101: HYMTYEQYRC WILNNAPSVG TGPVVDLLAG SAAGGTAVLC TYPLDLARTK LAYQVSNVAQ PVNSLGNFGR QPVYNGVKDV FKTVYKEGGV RSLYRGIGPT
201: LIGILPYAGL KFYIYEDLKS RVPEDYKRSV ILKLSCGALA GLFGQTLTYP LDVVRRQMQV QNKQPQNAND AFRIRGTFQG LFLIIRCQGW RQLFAGLSLN
301: YVKVVPSVAI GFTTYDMMKN LLGVPPREKA HPLTGNSNK
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.