CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52207	Soybean	cytosol	95.58	95.86
VIT_04s0008g01060.t01	Wine grape	cytosol	74.04	72.97
Solyc08g062860.2.1	Tomato	cytosol	69.62	68.8
PGSC0003DMT400021172	Potato	plastid	68.14	68.75
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.6	66.97
CDX84024	Canola	cytosol	64.9	66.87
CDX96850	Canola	cytosol	65.19	66.77
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.01	66.36
Bra016697.1-P	Field mustard	cytosol	64.6	66.16
AT1G14560.1	Thale cress	cytosol	64.31	65.86
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	64.31	64.5
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	63.72	63.72
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	63.42	63.24
TraesCS3D01G209300.1	Wheat	plastid	63.13	63.13
TraesCS3A01G206300.1	Wheat	plastid	62.83	62.83
EES00940	Sorghum	plastid	62.83	62.65
Zm00001d011226_P002	Maize	plastid	62.54	62.35
Os01t0708900-01	Rice	cytosol, extracellular, peroxisome	61.95	62.31
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	43.36	62.03
Zm00001d011697_P001	Maize	peroxisome	60.47	61.75
TraesCS3B01G280800.1	Wheat	cytosol, mitochondrion, plastid	61.06	61.42
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	61.06	61.42
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	60.77	61.13
EES01355	Sorghum	extracellular	60.47	61.01
CDY67915	Canola	cytosol	41.59	55.95
KRH49045	Soybean	cytosol	51.62	54.18
HORVU3Hr1G066850.4	Barley	mitochondrion	53.1	52.17
KRH77631	Soybean	cytosol	34.22	35.15
KRH27854	Soybean	cytosol	33.92	34.85
KRH68888	Soybean	cytosol	34.22	33.62
KRG97138	Soybean	cytosol	34.22	33.62
KRH06509	Soybean	cytosol	34.81	33.24
KRH47947	Soybean	mitochondrion	34.51	32.96
KRH75891	Soybean	cytosol, peroxisome	17.4	30.57
KRH49196	Soybean	endoplasmic reticulum	24.78	30.55
KRH15889	Soybean	endoplasmic reticulum	21.24	30.13
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	29.2	29.73
KRH00061	Soybean	cytosol	28.61	29.22
KRH15037	Soybean	cytosol	28.02	29.14
KRH73096	Soybean	cytosol	27.43	28.44
KRH49367	Soybean	plastid	30.38	26.96
KRH02242	Soybean	cytosol	25.37	26.3
KRH65751	Soybean	plastid	29.5	26.04
KRH37122	Soybean	cytosol	25.07	25.91
KRH12112	Soybean	cytosol	24.78	25.61
KRH50868	Soybean	cytosol	24.48	25.08
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	22.12	23.66
KRH61786	Soybean	cytosol, nucleus, plastid	26.55	23.02
KRH52458	Soybean	extracellular	26.55	23.02
KRH44680	Soybean	extracellular	25.37	22.75
KRH05133	Soybean	mitochondrion	28.02	22.73
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	26.84	22.25
KRH46981	Soybean	plastid	24.78	22.05
KRH06795	Soybean	cytosol	29.79	21.35
KRG94737	Soybean	cytosol	29.5	20.96
KRH70079	Soybean	cytosol	29.79	20.91
KRH43178	Soybean	plastid	25.07	20.48
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	25.07	20.43
KRH62352	Soybean	cytosol, peroxisome, plastid	25.07	20.43
KRH41046	Soybean	cytosol	27.43	18.9
KRH59718	Soybean	cytosol	27.73	18.8
KRH63894	Soybean	cytosol	25.66	18.59
KRH54061	Soybean	cytosol	25.96	18.49

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100800243	MapMan:24.2.13	EMBL:ACUP02002171	EnsemblPlantsGene:GLYMA_04G052300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0015217	GO:GO:0015228
GO:GO:0015866	GO:GO:0016020	GO:GO:0016021	GO:GO:0035349	GO:GO:0055085	GO:GO:0080121
GO:GO:0080122	UniProt:I1JTX9	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH61524	ProteinID:KRH61524
ProteinID:KRH61524.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF617	SUPFAM:SSF103506	UniParc:UPI000233A941	:

Description

hypothetical protein

Coordinates

chr4:-:4244724..4248426

Molecular Weight (calculated)

37028.0 Da

IEP (calculated)

10.150

GRAVY (calculated)

-0.076

Length

339 amino acids

Sequence
(BLAST)

001: MDSSQGSTIA GFVDNASIQR NETSFDGVPV YVKELIAGGF AGALSKTTVA PLERVKILWQ TRTPGFHSLG VYQSMNKLLK HEGFLGLYKG NGASVIRIVP
101: YAALHFMTYE RYKSWILNNY PALGTGPFID LLAGSAAGGT SVLCTYPLDL ARTKLAYQVA DTRGGSIKDG MKGVQPAHNG IKGVLTSVYK EGGVRGLYRG
201: AGPTLTGILP YAGLKFYMYE KLKTHVPEEH QRSIMMRLSC GALAGLFGQT LTYPLDVVKR QMQVGSLQNA AHEDARYKST IDALRMIVRN QGWRQLFHGV
301: SINYIRIVPS AAISFTTYDM MKSWLGIPPQ QKSRSVSAA

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.