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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH06509 Soybean cytosol 98.59 98.59
KRH68888 Soybean cytosol 91.27 93.91
KRG97138 Soybean cytosol 90.7 93.33
VIT_15s0046g01290.t01 Wine grape cytosol 89.01 89.27
CDY66909 Canola cytosol, mitochondrion, plastid 30.42 88.52
Solyc10g011670.2.1 Tomato cytosol 88.17 88.17
GSMUA_Achr3P32000_001 Banana cytosol 88.45 87.96
PGSC0003DMT400049872 Potato cytosol 87.89 87.89
GSMUA_Achr7P24620_001 Banana cytosol 88.17 87.68
KRH77631 Soybean cytosol 81.41 87.58
CDY11371 Canola cytosol 83.38 87.32
Bra007623.1-P Field mustard cytosol 83.1 87.02
CDX74363 Canola cytosol 86.48 86.97
CDX71722 Canola cytosol 82.54 86.69
Bra000944.1-P Field mustard cytosol 86.2 86.69
CDX91877 Canola cytosol 86.2 86.69
GSMUA_Achr2P06340_001 Banana cytosol 87.32 86.59
KRH27854 Soybean cytosol 80.28 86.36
Bra037383.1-P Field mustard cytosol 84.79 86.0
CDY48505 Canola cytosol 84.79 86.0
CDY07175 Canola cytosol 84.79 86.0
EES20024 Sorghum cytosol 85.07 85.07
Solyc01g095570.2.1 Tomato cytosol 84.79 84.79
PGSC0003DMT400000597 Potato cytosol 84.51 84.51
CDY01954 Canola mitochondrion 46.48 83.76
Os05t0585900-01 Rice cytosol, mitochondrion 83.1 83.1
HORVU1Hr1G092860.1 Barley cytosol 82.54 82.77
TraesCS1D01G434000.1 Wheat cytosol 81.97 82.2
TraesCS1B01G459400.1 Wheat cytosol 81.97 82.2
TraesCS1A01G425000.1 Wheat cytosol 81.97 82.2
AT4G01100.2 Thale cress cytosol 84.23 81.69
GSMUA_Achr8P25060_001 Banana cytosol, mitochondrion, plastid 33.24 77.12
GSMUA_Achr8P25070_001 Banana endoplasmic reticulum, plasma membrane, plastid 61.69 77.11
KRH49045 Soybean cytosol 32.11 35.29
KRH49196 Soybean endoplasmic reticulum 27.32 35.27
KRH65929 Soybean cytosol, mitochondrion, peroxisome 32.68 34.83
KRH15037 Soybean cytosol 31.83 34.66
KRH52207 Soybean cytosol 32.96 34.62
KRH61524 Soybean cytosol 32.96 34.51
KRH73096 Soybean cytosol 30.99 33.64
KRH15889 Soybean endoplasmic reticulum 21.97 32.64
KRH00061 Soybean cytosol 30.14 32.23
KRH12112 Soybean cytosol 29.3 31.71
KRH75891 Soybean cytosol, peroxisome 17.18 31.61
KRH37122 Soybean cytosol 29.01 31.4
KRH02242 Soybean cytosol 27.89 30.28
KRH50868 Soybean cytosol 28.17 30.21
KRH61786 Soybean cytosol, nucleus, plastid 30.99 28.13
KRH52458 Soybean extracellular 30.7 27.88
KRH63894 Soybean cytosol 34.93 26.5
KRH49367 Soybean plastid 28.45 26.44
KRH65751 Soybean plastid 28.45 26.3
KRH06795 Soybean cytosol 34.93 26.22
KRG94737 Soybean cytosol 35.21 26.21
KRH70079 Soybean cytosol 35.21 25.88
KRH54061 Soybean cytosol 34.65 25.84
KRH03708 Soybean cytosol, mitochondrion, nucleus, plastid 29.3 25.43
KRH05133 Soybean mitochondrion 29.58 25.12
KRH62352 Soybean cytosol, peroxisome, plastid 29.3 25.0
KRH41046 Soybean cytosol 34.37 24.8
KRH00225 Soybean cytosol, endoplasmic reticulum, peroxisome 21.97 24.61
KRH43178 Soybean plastid 28.73 24.58
KRH53070 Soybean cytosol, peroxisome, plasma membrane 28.73 24.52
KRH59718 Soybean cytosol 34.08 24.2
KRH46981 Soybean plastid 21.13 19.68
KRH44680 Soybean extracellular 20.85 19.58
Protein Annotations
Gene3D:1.50.40.10EntrezGene:100814032MapMan:24.2.13EMBL:ACUP02004184EnsemblPlantsGene:GLYMA_07G058100GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005743GO:GO:0006810GO:GO:0006839GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085UniProt:I1KHX8InterPro:IPR018108InterPro:IPR023395EnsemblPlants:KRH47947
ProteinID:KRH47947ProteinID:KRH47947.1InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPFAM:PF00153
PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF648SUPFAM:SSF103506UniParc:UPI0002337ECB
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:5186025..5191713
Molecular Weight (calculated)
38266.5 Da
IEP (calculated)
9.645
GRAVY (calculated)
0.086
Length
355 amino acids
Sequence
(BLAST)
001: MASENVKTGD SAVTTIVNLA EEAKLAREGV VKAPSYALAS ICKSLVAGGV AGGVSRTAVA PLERLKILLQ VQNPHNIKYN GTVQGLKYIW RTEGFRGLFK
101: GNGTNCARIV PNSAVKFFSY EQASKGILHL YQQQTGNEDA QLTPLLRLGA GACAGIIAMS ATYPMDMVRG RITVQTEASP YQYRGMFHAL STVLREEGPR
201: ALYKGWLPSV IGVIPYVGLN FAVYESLKDY LIKSNPFGLV ENSELSVTTR LACGAAAGTV GQTVAYPLDV IRRRMQMVGW NHAASVLTGD GRGKVPLEYT
301: GMVDAFRKTV QHEGFGALYK GLVPNSVKVV PSIAIAFVTY EVVKDILGVE IRISD
Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)
001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD
Arabidopsis Description
ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.