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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH15889 Soybean endoplasmic reticulum 53.83 94.14
VIT_04s0008g05240.t01 Wine grape cytosol 69.38 73.05
CDX68843 Canola cytosol 22.49 71.76
TraesCS7A01G495700.1 Wheat cytosol, plastid 36.12 71.56
KRH52458 Soybean extracellular 66.75 71.36
KRH61786 Soybean cytosol, nucleus, plastid 66.51 71.1
PGSC0003DMT400053564 Potato cytosol, nucleus, plastid 66.03 69.35
Solyc08g061090.2.1 Tomato plastid 65.79 69.1
CDX68841 Canola cytosol 61.72 68.44
CDX75241 Canola cytoskeleton, cytosol, nucleus 61.24 67.02
Bra011344.1-P Field mustard cytosol 61.0 66.75
Bra007793.1-P Field mustard cytosol 62.44 65.58
CDY11524 Canola cytosol 62.44 65.58
CDX76755 Canola cytosol 61.96 65.24
AT4G32400.1 Thale cress cytosol 60.53 64.54
GSMUA_Achr7P10070_001 Banana cytosol 59.33 64.25
KRH03708 Soybean cytosol, mitochondrion, nucleus, plastid 62.44 63.81
GSMUA_Achr6P05150_001 Banana cytosol, plastid, vacuole 60.53 62.94
GSMUA_Achr7P10000_001 Banana mitochondrion 34.21 61.37
Zm00001d037640_P001 Maize plastid 58.13 59.85
Os05t0171300-01 Rice mitochondrion, plastid 59.09 59.52
Zm00001d009799_P001 Maize plastid 57.18 58.87
HORVU1Hr1G025480.1 Barley nucleus, peroxisome, vacuole 57.66 58.35
EES17800 Sorghum cytosol 57.89 57.76
TraesCS1A01G115500.1 Wheat golgi 56.94 57.63
TraesCS1D01G116900.1 Wheat cytosol 57.18 57.59
TraesCS1B01G135400.1 Wheat cytosol 56.46 57.28
Os06t0602700-01 Rice plastid 57.89 57.21
Zm00001d046400_P002 Maize mitochondrion 56.46 56.19
EER90006 Sorghum plastid 56.46 56.06
TraesCS7D01G483000.1 Wheat cytosol 55.98 55.32
TraesCS7B01G401600.1 Wheat cytosol 55.98 55.19
HORVU7Hr1G111040.2 Barley cytosol 55.5 54.98
GSMUA_Achr10P... Banana endoplasmic reticulum 55.74 52.13
TraesCS6B01G210000.1 Wheat plastid 52.39 51.05
Os02t0202400-01 Rice plastid 51.44 50.59
TraesCS6D01G168200.1 Wheat golgi 51.91 50.58
TraesCS6A01G175100.1 Wheat plastid 52.39 50.58
Zm00001d015746_P001 Maize plastid 50.0 47.83
EES04720 Sorghum plastid 49.76 47.82
KRH44680 Soybean extracellular 29.9 33.07
KRH46981 Soybean plastid 29.9 32.81
KRH77631 Soybean cytosol 24.16 30.61
KRH27854 Soybean cytosol 23.92 30.3
KRH06509 Soybean cytosol 25.36 29.86
KRH68888 Soybean cytosol 24.64 29.86
KRH47947 Soybean mitochondrion 25.12 29.58
KRG97138 Soybean cytosol 24.4 29.57
KRH75891 Soybean cytosol, peroxisome 13.64 29.53
KRH49196 Soybean endoplasmic reticulum 18.9 28.73
KRH61524 Soybean cytosol 22.73 28.02
KRH52207 Soybean cytosol 22.49 27.81
KRH65929 Soybean cytosol, mitochondrion, peroxisome 22.01 27.63
KRH49045 Soybean cytosol 21.29 27.55
KRH43178 Soybean plastid 27.03 27.23
KRH50868 Soybean cytosol 21.53 27.19
KRH62352 Soybean cytosol, peroxisome, plastid 27.03 27.16
KRH53070 Soybean cytosol, peroxisome, plasma membrane 26.79 26.92
KRH02242 Soybean cytosol 21.05 26.91
KRH00061 Soybean cytosol 21.05 26.51
KRH15037 Soybean cytosol 20.57 26.38
KRH73096 Soybean cytosol 20.57 26.3
KRH12112 Soybean cytosol 20.57 26.22
KRH37122 Soybean cytosol 20.57 26.22
KRH49367 Soybean plastid 22.49 24.61
KRH65751 Soybean plastid 22.25 24.22
KRH00225 Soybean cytosol, endoplasmic reticulum, peroxisome 17.7 23.34
KRH63894 Soybean cytosol 25.12 22.44
KRH41046 Soybean cytosol 26.08 22.15
KRH54061 Soybean cytosol 25.12 22.06
KRG94737 Soybean cytosol 24.88 21.8
KRH59718 Soybean cytosol 26.08 21.8
KRH06795 Soybean cytosol 24.4 21.56
KRH70079 Soybean cytosol 24.88 21.53
Protein Annotations
Gene3D:1.50.40.10EntrezGene:100816041MapMan:24.2.13EMBL:ACUP02010679EnsemblPlantsGene:GLYMA_17G209500GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005743GO:GO:0006810GO:GO:0006839GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085UniProt:I1MWR0InterPro:IPR018108InterPro:IPR023395EnsemblPlants:KRH05133
ProteinID:KRH05133ProteinID:KRH05133.1InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPFAM:PF00153
PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF182SUPFAM:SSF103506UniParc:UPI000233DF4F
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr17:-:34555629..34559379
Molecular Weight (calculated)
45368.0 Da
IEP (calculated)
9.342
GRAVY (calculated)
-0.137
Length
418 amino acids
Sequence
(BLAST)
001: MGRRGIKLFD EERNGLFSIS NFGSQWGGVR GDGVQDPVNL AVYASISQMG MGFGVQEPNP SSSSSDGDNS QHNGGMSMRM RIPCTELYVR YVQSEGKVKI
101: LGVPEEEEEE VVKGVKKKKK GGVFRGLRIK VKNSSLRRLV SGAFAGAVSR TTVAPLETIR THLMVGSSGS STGEVFRNIM ETDGWKGLFR GNFVNVIRVA
201: PSKAIELLAY ETVNKNLSPK PGEHSKLPIP ASLIAGACAG VCSTICTYPL ELLKTRLTIQ RGVYDGLLDA FLKIVREEGA GELYRGLTPS LIGVIPYSAT
301: NYFAYDTLRK AYRKIFKKEK IGNIETLLIG SAAGAFSSSA TFPLEVARKH MQVGALSGRQ VYKNVIHALA SILEQEGIQG LYKGLGPSCM KLVPAAGISF
401: MCYEACKRIL VEDDDDEE
Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.