Factsheet for GSMUA_Achr6P05150_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10070_001	Banana	cytosol	81.34	84.72
GSMUA_Achr7P10000_001	Banana	mitochondrion	46.27	79.83
TraesCS7A01G495700.1	Wheat	cytosol, plastid	39.8	75.83
KRH15889	Soybean	endoplasmic reticulum	44.78	75.31
Zm00001d009799_P001	Maize	plastid	70.15	69.46
Zm00001d037640_P001	Maize	plastid	69.15	68.47
VIT_04s0008g05240.t01	Wine grape	cytosol	67.41	68.26
EES17800	Sorghum	cytosol	68.91	66.11
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	65.42	66.08
Solyc08g061090.2.1	Tomato	plastid	65.17	65.83
CDX68843	Canola	cytosol	21.39	65.65
VIT_11s0016g05110.t01	Wine grape	cytosol	64.43	64.75
TraesCS1A01G115500.1	Wheat	golgi	66.42	64.65
TraesCS1D01G116900.1	Wheat	cytosol	66.67	64.58
TraesCS1B01G135400.1	Wheat	cytosol	66.17	64.56
Os05t0171300-01	Rice	mitochondrion, plastid	66.42	64.34
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	65.67	63.92
Os06t0602700-01	Rice	plastid	67.16	63.83
Zm00001d046400_P002	Maize	mitochondrion	66.17	63.33
EER90006	Sorghum	plastid	65.92	62.95
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	63.68	62.59
HORVU7Hr1G111040.2	Barley	cytosol	65.67	62.56
TraesCS7B01G401600.1	Wheat	cytosol	65.92	62.5
TraesCS7D01G483000.1	Wheat	cytosol	65.42	62.17
GSMUA_Achr10P...	Banana	endoplasmic reticulum	67.66	60.85
KRH05133	Soybean	mitochondrion	62.94	60.53
AT4G32400.1	Thale cress	cytosol	58.96	60.46
KRH52458	Soybean	extracellular	58.46	60.1
Bra007793.1-P	Field mustard	cytosol	59.45	60.05
CDY11524	Canola	cytosol	59.45	60.05
CDX68841	Canola	cytosol	56.22	59.95
CDX76755	Canola	cytosol	58.96	59.7
KRH61786	Soybean	cytosol, nucleus, plastid	57.96	59.59
CDX75241	Canola	cytoskeleton, cytosol, nucleus	56.47	59.42
Bra011344.1-P	Field mustard	cytosol	56.22	59.16
TraesCS6B01G210000.1	Wheat	plastid	59.7	55.94
TraesCS6D01G168200.1	Wheat	golgi	58.96	55.24
TraesCS6A01G175100.1	Wheat	plastid	59.45	55.2
Zm00001d015746_P001	Maize	plastid	57.96	53.32
Os02t0202400-01	Rice	plastid	55.72	52.71
EES04720	Sorghum	plastid	56.97	52.64
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.37	34.23
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.12	34.01
GSMUA_Achr6P30940_001	Banana	cytosol	30.35	33.98
GSMUA_Achr6P03740_001	Banana	cytosol	29.6	32.87
GSMUA_Achr3P32000_001	Banana	cytosol	27.86	31.37
GSMUA_Achr7P24620_001	Banana	cytosol	27.86	31.37
GSMUA_Achr2P06340_001	Banana	cytosol	27.86	31.28
GSMUA_Achr2P14780_001	Banana	mitochondrion	25.37	29.48
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	11.19	29.41
GSMUA_Achr8P02430_001	Banana	cytosol	25.12	28.77
GSMUA_Achr10P...	Banana	cytosol	24.38	28.24
GSMUA_Achr10P...	Banana	cytosol	23.63	28.19
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	19.65	27.82
GSMUA_Achr11P...	Banana	extracellular	6.97	27.72
GSMUA_Achr10P...	Banana	mitochondrion	9.2	27.61
GSMUA_Achr8P22520_001	Banana	cytosol	22.64	27.49
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	22.64	26.92
GSMUA_Achr7P09310_001	Banana	cytosol	21.64	25.14
GSMUA_Achr6P33950_001	Banana	plastid	24.63	24.75
GSMUA_Achr10P...	Banana	cytosol	23.88	24.68
GSMUA_Achr11P...	Banana	cytosol	7.46	23.81
GSMUA_Achr9P03630_001	Banana	mitochondrion	21.64	23.08
GSMUA_AchrUn_...	Banana	cytosol	27.61	21.6
GSMUA_Achr5P05990_001	Banana	cytosol	27.36	21.4
GSMUA_Achr8P26070_001	Banana	cytosol	26.87	20.97
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	6.97	18.3

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr6G05150_001	EnsemblPlants:GSMUA_Achr6P05150_001	EnsemblPlants:GSMUA_Achr6T05150_001	InterPro:IPR018108
InterPro:IPR023395	UniProt:M0T4B3	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF358	SUPFAM:SSF103506	UniParc:UPI0002963D5F
SEG:seg	:	:	:	:	:

Description

Protein brittle-1, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G05150_001]

Coordinates

chr6:-:3487653..3490188

Molecular Weight (calculated)

43402.7 Da

IEP (calculated)

9.368

GRAVY (calculated)

0.020

Length

402 amino acids

Sequence
(BLAST)

001: MADKRLQAVE KKSDVFFLPF PELGFSWNEG LYPSGGLFAS VGQMGVGFGV SPNPPNPSDN SVNVPGTDLY VKYVSPDVGY RVLGTPAEPA AEATNVIAEV
101: VANKKEKKGG LKARIRIGNL HFRRLISGAI AGAVSRTAVA PLETIRTHLM VGSNGNSTTE VFQSIMETEG WKGLFRGNFV NVIRVAPSKA IELFAYDTAK
201: KVLTPKDGKP PKLPVPSSLV AGAFAGVSST LCTYPLELLK TRLTIQRDVY DNLLHAFLKI VYDEGPSELY RGLTPSLIGV MPYAATNYFA YESLKKFYRK
301: TFETEEIGSI ATLLIGSAAG AISSGTTFPL EVARKHMQVG AVGGRQVYKN MLHAFLSILE KEGIGGLYKG LGPSWMKLVP AAGISFMCYE ACKKILIDEE
401: DA

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.