Factsheet for GSMUA_Achr4P24190_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	mitochondrion
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	86.91	87.21
Zm00001d009318_P001	Maize	cytosol	29.87	78.76
Zm00001d028008_P001	Maize	mitochondrion	70.47	77.49
Zm00001d052515_P001	Maize	cytosol	37.92	77.4
PGSC0003DMT400004751	Potato	mitochondrion	41.28	76.88
Bra031891.1-P	Field mustard	cytosol	68.12	75.19
GSMUA_Achr2P14780_001	Banana	mitochondrion	83.89	72.25
Zm00001d014331_P001	Maize	cytosol	39.93	70.83
CDX97455	Canola	plastid	32.21	63.58
VIT_10s0042g01030.t01	Wine grape	cytosol	26.17	63.41
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	83.56	59.14
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	81.54	58.41
KXG39987	Sorghum	peroxisome	83.89	58.28
HORVU4Hr1G078650.2	Barley	peroxisome	81.54	58.13
Zm00001d028009_P001	Maize	peroxisome	82.55	57.88
TraesCS4D01G304600.1	Wheat	peroxisome	81.54	57.86
TraesCS4B01G306400.1	Wheat	peroxisome	81.54	57.86
KRH62352	Soybean	cytosol, peroxisome, plastid	80.54	57.69
VIT_00s0665g00020.t01	Wine grape	plastid	79.53	57.38
KRH43178	Soybean	plastid	79.87	57.35
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	81.21	57.21
Zm00001d048218_P001	Maize	endoplasmic reticulum	82.55	56.81
VIT_18s0001g05620.t01	Wine grape	cytosol	83.56	56.21
CDY31292	Canola	cytosol	65.77	56.0
CDY14527	Canola	plastid	78.19	55.88
CDY08834	Canola	plastid	78.19	55.74
Bra024342.1-P	Field mustard	plastid	77.85	55.5
CDX68026	Canola	plastid	73.83	55.42
Solyc05g051560.2.1	Tomato	nucleus	78.86	55.29
Bra003653.1-P	Field mustard	plastid	73.49	55.16
PGSC0003DMT400043297	Potato	cytosol, plastid	77.85	55.11
CDX79251	Canola	plastid	73.49	55.03
Solyc04g056260.1.1	Tomato	cytosol, nucleus	78.52	54.93
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	78.86	54.91
AT1G78180.1	Thale cress	plastid	75.84	54.07
Solyc04g074130.2.1	Tomato	cytosol	77.85	53.58
PGSC0003DMT400016387	Potato	cytosol	77.52	53.35
Zm00001d014170_P001	Maize	cytosol	33.56	52.08
CDY33993	Canola	plastid	59.73	49.86
GSMUA_Achr10P...	Banana	cytosol	50.34	38.56
CDY39471	Canola	cytosol	44.97	33.42
GSMUA_Achr11P...	Banana	extracellular	10.07	29.7
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	32.21	28.4
GSMUA_Achr3P32000_001	Banana	cytosol	31.88	26.61
GSMUA_Achr2P06340_001	Banana	cytosol	31.88	26.54
GSMUA_Achr7P10070_001	Banana	cytosol	34.23	26.42
GSMUA_Achr7P24620_001	Banana	cytosol	31.21	26.05
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	34.23	25.37
GSMUA_Achr10P...	Banana	cytosol	28.86	24.78
GSMUA_Achr7P10000_001	Banana	mitochondrion	19.13	24.46
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	23.15	24.3
GSMUA_Achr7P09310_001	Banana	cytosol	27.85	23.99
GSMUA_Achr8P02430_001	Banana	cytosol	28.19	23.93
GSMUA_Achr9P03630_001	Banana	mitochondrion	29.87	23.61
GSMUA_Achr8P22520_001	Banana	cytosol	25.84	23.26
GSMUA_Achr11P...	Banana	cytosol	9.73	23.02
GSMUA_Achr10P...	Banana	cytosol	25.84	22.85
GSMUA_Achr10P...	Banana	endoplasmic reticulum	33.89	22.6
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	10.74	20.91
GSMUA_Achr6P30940_001	Banana	cytosol	24.83	20.61
GSMUA_Achr6P03740_001	Banana	cytosol	24.5	20.17
GSMUA_Achr10P...	Banana	mitochondrion	8.72	19.4
GSMUA_Achr6P33950_001	Banana	plastid	25.5	19.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	9.06	17.65
GSMUA_Achr8P26070_001	Banana	cytosol	29.53	17.09
GSMUA_AchrUn_...	Banana	cytosol	28.19	16.34
GSMUA_Achr5P05990_001	Banana	cytosol	27.52	15.95

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr4G24190_001	EnsemblPlants:GSMUA_Achr4P24190_001	EnsemblPlants:GSMUA_Achr4T24190_001	InterPro:IPR018108
InterPro:IPR023395	UniProt:M0SRN0	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339	SUPFAM:SSF103506	UniParc:UPI0002966A68

Description

Putative Calcium-binding mitochondrial carrier protein SCaMC-1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G24190_001]

Coordinates

chr4:+:24086725..24090922

Molecular Weight (calculated)

32928.6 Da

IEP (calculated)

9.330

GRAVY (calculated)

0.252

Length

298 amino acids

Sequence
(BLAST)

001: MNTTKHLWAG AIAAMVSRTF VAPLERLKLE YIVRGEQSNL FVLIHKIATA QGLKGFWKGN FVNILRTAPF KAVNFYAYDT YRKQLLKISG NEETTNFERF
101: LAGAAAGITA TMLCIPMDTI RTKMIAPGGE ALGGVIGVFR HMVETEGFFS LYKGLVPSLV SMAPSAAVFY SVYDILKSAY LHSPEGMKRL ALMKQQEDEE
201: VNALDQLELG PVRTLLYGAI AGACAEVTTY PFEVVRRHLQ MQVQANKLNA FATFMKIVEQ GGVSALYAGM IPSLLQVLPS ASISYFVYEL MKIALRVE

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.