Factsheet for Solyc05g051560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043297	Potato	cytosol, plastid	96.71	97.62
Zm00001d052515_P001	Maize	cytosol	28.24	82.19
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.94	81.48
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.29	78.86
Zm00001d009318_P001	Maize	cytosol	20.94	78.76
Solyc04g056260.1.1	Tomato	cytosol, nucleus	77.88	77.7
Zm00001d028008_P001	Maize	mitochondrion	48.47	76.01
Bra031891.1-P	Field mustard	cytosol	47.06	74.07
Zm00001d014331_P001	Maize	cytosol	29.18	73.81
GSMUA_Achr2P14780_001	Banana	mitochondrion	55.53	68.21
VIT_10s0042g01030.t01	Wine grape	cytosol	19.53	67.48
KRH43178	Soybean	plastid	64.24	65.78
VIT_00s0665g00020.t01	Wine grape	plastid	63.06	64.89
CDY31292	Canola	cytosol	52.94	64.29
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	62.35	62.95
CDY08834	Canola	plastid	61.88	62.92
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	63.29	62.85
Bra024342.1-P	Field mustard	plastid	61.65	62.68
CDY14527	Canola	plastid	61.41	62.59
HORVU4Hr1G078650.2	Barley	peroxisome	61.41	62.44
TraesCS4B01G306400.1	Wheat	peroxisome	61.65	62.38
Zm00001d028009_P001	Maize	peroxisome	62.35	62.35
TraesCS4D01G304600.1	Wheat	peroxisome	61.41	62.14
KXG39987	Sorghum	peroxisome	62.59	62.0
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	61.41	61.7
Zm00001d048218_P001	Maize	endoplasmic reticulum	62.82	61.66
CDX79251	Canola	plastid	57.65	61.56
Bra003653.1-P	Field mustard	plastid	57.41	61.46
CDX68026	Canola	plastid	57.18	61.21
CDX97455	Canola	plastid	21.65	60.93
Solyc04g074130.2.1	Tomato	cytosol	61.41	60.28
AT1G78180.1	Thale cress	plastid	58.59	59.57
CDY33993	Canola	plastid	48.24	57.42
Zm00001d014170_P001	Maize	cytosol	24.47	54.17
CDY39471	Canola	cytosol	36.71	38.9
Solyc10g011670.2.1	Tomato	cytosol	24.0	28.73
Solyc08g061090.2.1	Tomato	plastid	26.82	28.64
Solyc01g095570.2.1	Tomato	cytosol	23.53	28.17
Solyc08g062860.2.1	Tomato	cytosol	22.35	27.7
Solyc08g082020.2.1	Tomato	cytosol	22.82	27.17
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	21.65	25.92
Solyc12g008770.1.1	Tomato	extracellular	20.24	25.44
Solyc09g005250.2.1	Tomato	plastid	22.59	25.26
Solyc01g067070.2.1	Tomato	cytosol	19.06	24.47
Solyc12g099630.1.1	Tomato	cytosol	13.18	23.83
Solyc03g123990.2.1	Tomato	cytosol	19.06	22.07
Solyc03g118090.2.1	Tomato	cytosol	23.76	20.12
Solyc06g068720.2.1	Tomato	cytosol	22.59	19.2

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	UniProt:K4C1I7	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339	SUPFAM:SSF103506
EnsemblPlantsGene:Solyc05g051560.2	EnsemblPlants:Solyc05g051560.2.1	UniParc:UPI00027656F5	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:61932965..61937128

Molecular Weight (calculated)

46077.7 Da

IEP (calculated)

8.641

GRAVY (calculated)

0.003

Length

425 amino acids

Sequence
(BLAST)

001: MVNQSDPGRV RVSSLSISDL CLNSIGFNGS DGGLFLEDSG PRSFVSLIGN QGLCYSESRR RRIGFEVRGG TGGRFLSVTA SINGGGNEGF EEDSGETAAE
101: SEMQVCRRRV EKVEEEEEKK KVLSGGGAAL NTTKHLWAGA VAAAVSRTFV APLERLKLEY IVRGEQRHLL ELIKTIATNQ GIKGFWKGNF VNILRTAPFK
201: AINFYSYEKY RDHLLKLTGN EEATNLERFV AGAAAGITAT VLCIPMDTIR TVMVAPGGEA LGGLIGTFGH MIRTEGFFSL YKGLVPSIIS MAPSGAVFYG
301: VYDILKSAYL HSPEGRKRLQ NMKQGEDLNA LDQLELGTVR TLIYGAIAGA CAEAATYPFE VVRRQLQMQV RATKMSALAT SLKIVDQGGI PALYAGLTPS
401: LLQVLPSAAI SYFVYEFMKI VLKVE

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.