Factsheet for PGSC0003DMT400043297

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g051560.2.1	Tomato	nucleus	97.62	96.71
PGSC0003DMT400004751	Potato	mitochondrion	35.39	93.12
Zm00001d052515_P001	Maize	cytosol	28.27	81.51
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.48	81.48
Zm00001d009318_P001	Maize	cytosol	21.14	78.76
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.11	77.85
Zm00001d028008_P001	Maize	mitochondrion	48.46	75.28
Bra031891.1-P	Field mustard	cytosol	47.03	73.33
Zm00001d014331_P001	Maize	cytosol	29.22	73.21
GSMUA_Achr2P14780_001	Banana	mitochondrion	55.58	67.63
VIT_10s0042g01030.t01	Wine grape	cytosol	19.48	66.67
KRH43178	Soybean	plastid	64.61	65.54
VIT_00s0665g00020.t01	Wine grape	plastid	62.95	64.16
CDY31292	Canola	cytosol	52.97	63.71
CDY08834	Canola	plastid	62.0	62.44
Bra024342.1-P	Field mustard	plastid	61.76	62.2
CDY14527	Canola	plastid	61.52	62.11
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	62.0	62.0
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	62.95	61.92
CDX97455	Canola	plastid	22.09	61.59
CDX79251	Canola	plastid	58.19	61.56
HORVU4Hr1G078650.2	Barley	peroxisome	61.05	61.48
Bra003653.1-P	Field mustard	plastid	57.96	61.46
TraesCS4B01G306400.1	Wheat	peroxisome	61.28	61.43
CDX68026	Canola	plastid	57.72	61.21
TraesCS4D01G304600.1	Wheat	peroxisome	61.05	61.19
Zm00001d028009_P001	Maize	peroxisome	61.76	61.18
KXG39987	Sorghum	peroxisome	62.0	60.84
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	61.05	60.76
Zm00001d048218_P001	Maize	endoplasmic reticulum	62.23	60.51
PGSC0003DMT400016387	Potato	cytosol	61.52	59.82
AT1G78180.1	Thale cress	plastid	59.14	59.57
CDY33993	Canola	plastid	48.22	56.86
Zm00001d014170_P001	Maize	cytosol	24.47	53.65
CDY39471	Canola	cytosol	36.58	38.4
PGSC0003DMT400074454	Potato	plastid	12.59	29.61
PGSC0003DMT400049872	Potato	cytosol	24.7	29.3
PGSC0003DMT400000597	Potato	cytosol	24.23	28.73
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	27.08	28.64
PGSC0003DMT400021172	Potato	plastid	22.57	28.27
PGSC0003DMT400062351	Potato	cytosol	22.09	26.42
PGSC0003DMT400087691	Potato	mitochondrion	10.45	26.35
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	23.04	25.53
PGSC0003DMT400000910	Potato	cytosol	20.43	25.15
PGSC0003DMT400023766	Potato	cytosol	19.0	22.6
PGSC0003DMT400036927	Potato	cytosol	22.8	19.63

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:102596751	MapMan:24.2.13	ncoils:Coil	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
UniProt:M1BEE0	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400016806
PGSC:PGSC0003DMG400016806	EnsemblPlants:PGSC0003DMT400043297	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339
SUPFAM:SSF103506	UniParc:UPI000296CD1A	RefSeq:XP_006366231.1	SEG:seg	:	:

Description

Mitochondrial substrate carrier family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016806]

Coordinates

chr5:-:46493480..46498741

Molecular Weight (calculated)

45435.2 Da

IEP (calculated)

9.361

GRAVY (calculated)

0.044

Length

421 amino acids

Sequence
(BLAST)

001: MVNPSDPGRV RVSSLSSSDL CLNSIGFNGS DGGLFLEDSG PRSFVSLIGN QGLCSESRRR RIGLEVRGGT GGRFLSVTVS INGGGNEGFE EDSGETAAES
101: EMQVCRRRVE KVEEKKKVLS GGGAALNTTK HLWAGAVAAA VSRTFVAPLE RLKLEYIVRG EKRHLLEVIK TIAATQGIKG FWKGNFVNIL RTAPFKAINF
201: YSYEKYRDHL LKLTGNEEAT NLERFVAGAA AGITATVLCI PMDTIRTVMV APGGEALGGL IGTFGHMIRT EGFFSLYKGL VPSIISMAPS GAVFYGVYDI
301: LKSAYLHSPE GRKRLQNMKQ GEDLNALDQL ELGTVRTLIY GAIAGACAEA ATYPFEVVRR QLQMQVRATK MSALATSLKI VEQGGIPALY AGLTPSLLQV
401: LPSAAISYFI YEFMKIVLKV E

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.