Factsheet for TraesCS4D01G304600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G306400.1	Wheat	peroxisome	99.29	99.29
HORVU4Hr1G078650.2	Barley	peroxisome	97.14	97.61
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	98.1	97.4
Zm00001d052515_P001	Maize	cytosol	31.9	91.78
Zm00001d009318_P001	Maize	cytosol	24.29	90.27
Zm00001d028008_P001	Maize	mitochondrion	56.43	87.45
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	83.81	83.61
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.05	83.5
KXG39987	Sorghum	peroxisome	84.76	82.98
Zm00001d028009_P001	Maize	peroxisome	83.81	82.82
Zm00001d014331_P001	Maize	cytosol	33.1	82.74
PGSC0003DMT400004751	Potato	mitochondrion	31.19	81.88
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.86	81.54
Zm00001d048218_P001	Maize	endoplasmic reticulum	82.86	80.37
Bra031891.1-P	Field mustard	cytosol	49.05	76.3
GSMUA_Achr2P14780_001	Banana	mitochondrion	59.76	72.54
VIT_18s0001g05620.t01	Wine grape	cytosol	68.57	65.01
KRH43178	Soybean	plastid	62.86	63.61
VIT_10s0042g01030.t01	Wine grape	cytosol	18.57	63.41
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	62.38	62.98
CDX97455	Canola	plastid	22.62	62.91
CDY31292	Canola	cytosol	52.38	62.86
KRH62352	Soybean	cytosol, peroxisome, plastid	61.9	62.5
Solyc05g051560.2.1	Tomato	nucleus	62.14	61.41
PGSC0003DMT400043297	Potato	cytosol, plastid	61.19	61.05
Solyc04g056260.1.1	Tomato	cytosol, nucleus	61.9	61.03
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	62.14	60.98
Zm00001d014170_P001	Maize	cytosol	27.86	60.94
VIT_00s0665g00020.t01	Wine grape	plastid	59.76	60.77
CDY14527	Canola	plastid	60.24	60.67
CDY08834	Canola	plastid	60.24	60.53
Bra024342.1-P	Field mustard	plastid	60.0	60.29
CDX68026	Canola	plastid	56.43	59.7
Solyc04g074130.2.1	Tomato	cytosol	61.43	59.58
PGSC0003DMT400016387	Potato	cytosol	61.43	59.58
Bra003653.1-P	Field mustard	plastid	56.19	59.45
CDX79251	Canola	plastid	55.95	59.05
AT1G78180.1	Thale cress	plastid	57.14	57.42
CDY33993	Canola	plastid	47.86	56.3
CDY39471	Canola	cytosol	36.19	37.91
TraesCS1D01G434000.1	Wheat	cytosol	24.05	28.53
TraesCS1D01G116900.1	Wheat	cytosol	27.62	27.95
TraesCS5D01G306500.1	Wheat	plastid	19.52	27.24
TraesCS3D01G186300.1	Wheat	mitochondrion	24.52	26.28
TraesCS6D01G176300.3	Wheat	cytosol	20.95	26.27
TraesCS3D01G209300.1	Wheat	plastid	21.19	26.25
TraesCS7D01G483000.1	Wheat	cytosol	26.43	26.24
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	20.95	26.11
TraesCS7D01G056700.1	Wheat	cytosol	21.19	25.95
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	20.24	25.84
TraesCS6D01G168200.1	Wheat	golgi	25.95	25.41
TraesCS4D01G211700.2	Wheat	cytosol	19.76	24.2
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	18.1	22.62
TraesCS5D01G282200.1	Wheat	cytosol	20.0	21.93
TraesCS7D01G250600.1	Wheat	cytosol	17.62	20.33
TraesCS7D01G372900.1	Wheat	cytosol, plastid	22.62	18.3

Protein Annotations

EnsemblPlants:TraesCS4D01G304600.1	EnsemblPlantsGene:TraesCS4D01G304600	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF339	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
MapMan:24.2.13	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:473130814..473136926

Molecular Weight (calculated)

44592.7 Da

IEP (calculated)

9.039

GRAVY (calculated)

0.213

Length

420 amino acids

Sequence
(BLAST)

001: MSWLEMWLPA AAEGAAAGLF LDAGDAAAHG ALLAAMPGCS ASFGVPRRRR GRAPPGFLSM TMSVKGGRGF APAPVGLLTG GDDKGGGVEV AEGLVAGRGA
101: EGVVLVEADG KLTEEEAHSG AGAMNTTKHL WSGAVAAMVS RTVVAPLERL KLEYIVRGEQ RNLFELIQAI ATTEGLKGFW KGNLVNILRT APFKAVNFYA
201: YDSYRKQLLK WSGNEETTNL ERFIAGASAG VTATIMCIPM DTIRTKMVAP GGEALGGVIG VARHMIQTEG LFSLYKGLVP SLISMAPSGA VFYGVYDILK
301: MAYLHSPEGK RRISMMKQQG QEANALDQLE LGTVRTLLYG AIAGCCAEAA TYPFEVVRRQ LQLQVKATKM NALATCLKIV DKGGVPALYV GLIPSLLQVL
401: PSASISYFVY ELMKIVLKVE

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.