Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G093400.1 | Wheat | cytosol | 99.13 | 99.42 |
| TraesCS4B01G211000.1 | Wheat | plastid | 97.08 | 99.4 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 97.67 | 97.95 |
| Os03t0267700-01 | Rice | cytosol | 86.59 | 85.84 |
| Zm00001d047838_P001 | Maize | cytosol | 85.13 | 85.13 |
| OQU92863 | Sorghum | cytosol | 85.71 | 84.97 |
| OQU92679 | Sorghum | cytosol | 29.45 | 81.45 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 76.38 | 74.64 |
| KRH49196 | Soybean | endoplasmic reticulum | 56.56 | 70.55 |
| GSMUA_Achr10P... | Banana | cytosol | 68.8 | 70.03 |
| KRH15037 | Soybean | cytosol | 65.31 | 68.71 |
| KRH73096 | Soybean | cytosol | 65.01 | 68.2 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 66.76 | 68.15 |
| KRH00061 | Soybean | cytosol | 65.31 | 67.47 |
| KRH65929 | Soybean | cytosol, mitochondrion, peroxisome | 64.14 | 66.07 |
| PGSC0003DMT400062351 | Potato | cytosol | 67.64 | 65.91 |
| AT3G55640.4 | Thale cress | plastid | 63.27 | 65.36 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 67.64 | 65.35 |
| VIT_13s0019g02440.t01 | Wine grape | cytosol | 67.64 | 64.27 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 74.34 | 63.75 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 60.93 | 63.53 |
| CDY40244 | Canola | plastid | 61.81 | 63.28 |
| CDY07764 | Canola | plastid | 60.06 | 60.59 |
| Bra000026.1-P | Field mustard | plastid | 60.06 | 60.59 |
| CDY59491 | Canola | cytosol | 59.48 | 60.0 |
| CDY18420 | Canola | plastid | 60.35 | 60.0 |
| CDX93344 | Canola | plastid | 60.06 | 59.71 |
| Bra017151.1-P | Field mustard | plastid | 60.06 | 59.71 |
| Bra007181.1-P | Field mustard | plastid | 61.81 | 59.55 |
| CDY41199 | Canola | plastid | 62.39 | 59.44 |
| AT3G53940.1 | Thale cress | cytosol | 60.93 | 57.26 |
| CDX76183 | Canola | cytosol | 58.31 | 57.14 |
| CDY13155 | Canola | cytosol | 58.31 | 57.14 |
| Bra014855.1-P | Field mustard | cytosol | 59.48 | 56.98 |
| AT2G37890.1 | Thale cress | cytosol | 54.23 | 55.19 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 30.32 | 30.86 |
| TraesCS3D01G209300.1 | Wheat | plastid | 29.74 | 30.09 |
| TraesCS5D01G306500.1 | Wheat | plastid | 26.24 | 29.9 |
| TraesCS1D01G434000.1 | Wheat | cytosol | 30.61 | 29.66 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 28.86 | 29.55 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 28.57 | 28.57 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 26.24 | 26.79 |
| TraesCS3D01G186300.1 | Wheat | mitochondrion | 27.41 | 23.98 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 27.11 | 22.41 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 33.82 | 22.35 |
| TraesCS6D01G168200.1 | Wheat | golgi | 27.7 | 22.14 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 26.24 | 21.28 |
| TraesCS5D01G282200.1 | Wheat | cytosol | 23.62 | 21.15 |
| TraesCS7D01G250600.1 | Wheat | cytosol | 21.57 | 20.33 |
| TraesCS4D01G304600.1 | Wheat | peroxisome | 24.2 | 19.76 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G211700.2 | EnsemblPlantsGene:TraesCS4D01G211700 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF403 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:364033690..364036712
Molecular Weight (calculated)
37080.7 Da
IEP (calculated)
9.600
GRAVY (calculated)
-0.002
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEASVGMA AATVDGAAAV AARRYSTQQQ QQPQPQQHHN QPKLGTTLHL LAGGVAGAVS KTCTAPLARL TILFQVQGMH SDVATMRNTS IWREASRIVY
101: EEGLRAFWKG NLVTIAHRLP YSSISFYTYE KYKNWLQMIP GLDSNGGLGA DVGVRMVGGG LSGITAASLT YPLDLVRTRL AAQTNTAYYR GISHALFAIC
201: RDEGPRGLYK GLGPTLLGVG PSIAISFSVY ETLRSHWLLE RPCDSPIFIS LACGSLSGVA SSTFTFPLDL VRRRKQLEGA AGRANVYKTG LVGTFGHIIQ
301: TEGYRGLYRG ILPEYCKVVP SVGLIFMTYE TLKSMFTGGA SDE
101: EEGLRAFWKG NLVTIAHRLP YSSISFYTYE KYKNWLQMIP GLDSNGGLGA DVGVRMVGGG LSGITAASLT YPLDLVRTRL AAQTNTAYYR GISHALFAIC
201: RDEGPRGLYK GLGPTLLGVG PSIAISFSVY ETLRSHWLLE RPCDSPIFIS LACGSLSGVA SSTFTFPLDL VRRRKQLEGA AGRANVYKTG LVGTFGHIIQ
301: TEGYRGLYRG ILPEYCKVVP SVGLIFMTYE TLKSMFTGGA SDE
001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
Arabidopsis Description
Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.