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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07764 Canola plastid 97.94 97.94
CDY18420 Canola plastid 91.47 90.14
CDX93344 Canola plastid 90.88 89.57
AT2G37890.1 Thale cress cytosol 76.18 76.85
CDY13155 Canola cytosol 73.82 71.71
CDX76183 Canola cytosol 73.53 71.43
VIT_08s0007g01280.t01 Wine grape cytosol 69.41 70.24
KRH65929 Soybean cytosol, mitochondrion, peroxisome 66.47 67.87
PGSC0003DMT400062351 Potato cytosol 66.47 64.2
CDY40244 Canola plastid 62.94 63.88
Solyc09g011360.2.1 Tomato cytosol, peroxisome, plastid 66.47 63.66
Os01t0143100-01 Rice mitochondrion 57.94 61.18
Zm00001d047838_P001 Maize cytosol 61.18 60.64
OQU92863 Sorghum cytosol 61.47 60.4
GSMUA_Achr10P... Banana cytosol 59.41 59.94
Os03t0267700-01 Rice cytosol 60.88 59.83
CDY41199 Canola plastid 63.24 59.72
TraesCS4B01G211000.1 Wheat plastid 58.82 59.7
TraesCS4D01G211700.2 Wheat cytosol 60.0 59.48
Zm00001d039884_P002 Maize cytosol 57.35 59.45
GSMUA_Achr8P02430_001 Banana cytosol 61.18 59.26
HORVU4Hr1G060540.1 Barley cytosol 59.41 59.06
TraesCS4A01G093400.1 Wheat cytosol 59.41 59.06
EES00336 Sorghum cytosol 57.06 58.79
TraesCS3A01G058200.1 Wheat cytosol, mitochondrion, peroxisome 55.88 57.75
TraesCS3D01G058400.1 Wheat cytosol, mitochondrion, peroxisome 55.88 57.75
OQU92679 Sorghum cytosol 20.88 57.26
TraesCS3B01G070700.1 Wheat cytosol, mitochondrion, peroxisome 55.29 57.14
GSMUA_Achr6P33950_001 Banana plastid 60.59 51.5
HORVU3Hr1G011350.16 Barley mitochondrion, plastid 56.18 51.34
CDX68843 Canola cytosol 14.12 36.64
CDY01954 Canola mitochondrion 20.88 36.04
CDY68466 Canola cytosol 33.24 33.93
CDX71722 Canola cytosol 33.53 33.73
CDX94361 Canola cytosol 32.94 33.53
CDY11371 Canola cytosol 33.24 33.33
CDX84024 Canola cytosol 31.76 32.83
CDY45268 Canola endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 31.47 32.72
CDX96850 Canola cytosol 31.76 32.63
CDY07175 Canola cytosol 33.24 32.29
CDY48505 Canola cytosol 33.24 32.29
CDX74363 Canola cytosol 33.24 32.01
CDX91877 Canola cytosol 32.94 31.73
CDX97455 Canola plastid 13.53 30.46
CDX70930 Canola cytosol 17.35 30.41
CDY67915 Canola cytosol 22.35 30.16
CDY66909 Canola cytosol, mitochondrion, plastid 10.0 27.87
CDX68841 Canola cytosol 30.59 27.59
CDY19928 Canola cytosol 27.06 27.46
CDX85385 Canola cytosol 27.06 27.3
CDX86261 Canola cytosol 27.06 27.3
CDX75241 Canola cytoskeleton, cytosol, nucleus 30.59 27.23
CDY56673 Canola cytosol 27.06 27.14
CDX76755 Canola cytosol 30.29 25.94
CDY11524 Canola cytosol 30.29 25.88
CDX95305 Canola plastid 28.53 25.46
CDY23168 Canola plastid 28.53 25.46
CDX79251 Canola plastid 29.41 25.13
CDX68026 Canola plastid 29.12 24.94
CDX80771 Canola cytosol, plastid 27.65 23.27
CDY11199 Canola plastid 27.65 23.21
CDY14527 Canola plastid 27.94 22.78
CDY08834 Canola plastid 27.94 22.73
CDX70028 Canola cytosol 26.47 22.67
CDY14050 Canola cytosol 31.18 22.65
CDY55175 Canola cytosol 30.88 22.44
CDY00231 Canola cytosol 31.47 22.43
CDX86953 Canola cytosol 31.47 22.43
CDX71683 Canola cytosol 32.65 22.2
CDY05832 Canola cytosol 32.65 22.2
CDY25400 Canola cytosol, plastid 22.06 21.55
CDY29805 Canola cytosol 22.06 21.55
CDY31292 Canola cytosol 22.06 21.43
CDY36050 Canola cytosol, plastid 21.76 21.26
CDX82257 Canola cytosol 21.47 20.98
CDX98981 Canola endoplasmic reticulum, golgi 24.71 19.72
CDY33993 Canola plastid 20.0 19.05
CDY39471 Canola cytosol 20.29 17.21
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13GO:A0A078J5H0UniProt:A0A078J5H0EnsemblPlants:CDY59491ProteinID:CDY59491
ProteinID:CDY59491.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00026183001InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sfPFAM:PF00153PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF403
SUPFAM:SSF103506UniParc:UPI0004EC1525::::
Description
BnaC03g72120DBnaC03g72120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5H0]
Coordinates
chrLK033769:-:42139..44231
Molecular Weight (calculated)
36765.6 Da
IEP (calculated)
9.974
GRAVY (calculated)
0.126
Length
340 amino acids
Sequence
(BLAST)
001: MNIEARVGAA VDGALNPSTA VHSSVVDAGT LSLPQKQPQS HFGTVENLLA GGIAGAFSKT CTAPLARLTI LFQLQGMQSE AAVLGKPSLW REASRILNEE
101: GFRAFWKGNL VTVAHRLPYS ALNFYAYEKY NKFLYSNPVL QSYLGNARSS PFVHFVSGGL AGITAASATY PLDLVRTRLA AQRNAMYYQG IGHAFRTICR
201: EEGFLGLYKG LGATMLGVGP TLAINFASYE SLKSFWLSHR PDDSTLIISL GCGSLAGVAS STATFPLDLV RRRMQVEGAG GRARVYKTGL FGTFKHIFKS
301: EGIRGLYRGL LPEYFKVVPG VGITFMVYES LKMLLCPPAP
Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)
001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN
Arabidopsis Description
Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.