CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033473.1-P	Field mustard	plastid	98.69	98.69
CDY23168	Canola	plastid	98.69	98.69
AT3G51870.1	Thale cress	plastid	89.76	89.76
KRH75891	Soybean	cytosol, peroxisome	36.75	72.54
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	35.43	71.05
KRH65751	Soybean	plastid	68.77	68.23
CDX70930	Canola	cytosol	34.38	67.53
GSMUA_Achr11P...	Banana	extracellular	17.59	66.34
Solyc09g005250.2.1	Tomato	plastid	65.62	65.79
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	65.62	65.79
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	65.09	65.09
KRH49367	Soybean	plastid	65.09	64.92
CDX80771	Canola	cytosol, plastid	68.5	64.6
CDY11199	Canola	plastid	68.5	64.44
GSMUA_Achr11P...	Banana	cytosol	20.73	62.7
GSMUA_Achr9P03630_001	Banana	mitochondrion	61.94	62.6
Os01t0265200-01	Rice	plastid	59.32	59.32
TraesCS3B01G211500.1	Wheat	golgi	59.84	58.61
TraesCS3A01G181500.1	Wheat	golgi	59.84	58.16
TraesCS3D01G186300.1	Wheat	mitochondrion	59.58	57.91
Zm00001d040351_P005	Maize	mitochondrion	59.32	55.66
EES02734	Sorghum	mitochondrion	58.01	55.25
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	45.67	54.89
HORVU3Hr1G037170.3	Barley	plastid	59.58	53.54
CDX84024	Canola	cytosol	25.46	29.48
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	25.2	29.36
CDX94361	Canola	cytosol	25.72	29.34
CDX96850	Canola	cytosol	25.46	29.31
CDY68466	Canola	cytosol	25.46	29.13
CDY40244	Canola	plastid	25.2	28.66
CDY11371	Canola	cytosol	25.46	28.61
CDX76183	Canola	cytosol	26.25	28.57
CDY13155	Canola	cytosol	26.25	28.57
CDY59491	Canola	cytosol	25.46	28.53
CDY07764	Canola	plastid	25.2	28.24
CDX71722	Canola	cytosol	24.93	28.11
CDY18420	Canola	plastid	25.2	27.83
CDX93344	Canola	plastid	25.2	27.83
CDY67915	Canola	cytosol	18.37	27.78
CDY07175	Canola	cytosol	25.2	27.43
CDY48505	Canola	cytosol	25.2	27.43
CDY01954	Canola	mitochondrion	14.17	27.41
CDY66909	Canola	cytosol, mitochondrion, plastid	8.66	27.05
CDY41199	Canola	plastid	25.46	26.94
CDX74363	Canola	cytosol	24.93	26.91
CDX91877	Canola	cytosol	24.93	26.91
CDX68843	Canola	cytosol	9.19	26.72
CDX97455	Canola	plastid	10.5	26.49
CDX82257	Canola	cytosol	23.36	25.57
CDY36050	Canola	cytosol, plastid	22.83	25.0
CDX85385	Canola	cytosol	22.05	24.93
CDX86261	Canola	cytosol	22.05	24.93
CDY19928	Canola	cytosol	21.52	24.48
CDY29805	Canola	cytosol	22.05	24.14
CDY25400	Canola	cytosol, plastid	22.05	24.14
CDX68841	Canola	cytosol	23.88	24.14
CDY56673	Canola	cytosol	21.0	23.6
CDX68026	Canola	plastid	24.41	23.43
CDX79251	Canola	plastid	24.41	23.37
CDX75241	Canola	cytoskeleton, cytosol, nucleus	23.36	23.3
CDX76755	Canola	cytosol	23.62	22.67
CDY11524	Canola	cytosol	23.62	22.61
CDY08834	Canola	plastid	23.62	21.53
CDY14527	Canola	plastid	23.36	21.34
CDY31292	Canola	cytosol	19.42	21.14
CDY14050	Canola	cytosol	24.67	20.09
CDY55175	Canola	cytosol	24.67	20.09
CDX86953	Canola	cytosol	24.41	19.5
CDY00231	Canola	cytosol	24.41	19.5
CDX70028	Canola	cytosol	19.68	18.89
CDY05832	Canola	cytosol	24.41	18.6
CDX71683	Canola	cytosol	24.41	18.6
CDY33993	Canola	plastid	17.32	18.49
CDX98981	Canola	endoplasmic reticulum, golgi	19.16	17.14
CDY39471	Canola	cytosol	15.75	14.96

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078E0X3	EnsemblPlants:CDX95305	ProteinID:CDX95305	ProteinID:CDX95305.1
GO:GO:0006810	GO:GO:0008150	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00100966001	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF619	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EE025F	SEG:seg

Description

BnaC04g28530D

Coordinates

chrLK031888:+:95334..97954

Molecular Weight (calculated)

41539.8 Da

IEP (calculated)

9.994

GRAVY (calculated)

0.043

Length

381 amino acids

Sequence
(BLAST)

001: MGDEDRAILT FHRIPSLNSS ILTSSPSKSS TVQFRHRVLR SSAPGDVGFG SKFACITMAE KCEQREFSPT PAQLLSNPLA ILALVPKDAA IFAAGAIAGA
101: AAKTVTAPLD RIKLLMQTHG IRIGHQSAKK AIGFVEAITL IGKEEGMKGY WKGNLPQVIR VLPYSAVQLL AYESYKKLFK GTDDQLSVIG RLAAGACAGM
201: TSTLLTYPLD VLRLRLAVEP GYRTMSQVAL SMLREEGLAS FYYGLGPSLV GIAPYIAVNF CIFDLVKKSL PEEYRQKAQS SLFTAVLSAG IATLTCYPLD
301: TVRRQMQMRG TPYKSIPEAF AGIIDGDGLI GLYRGFLPNA LKTLPNSSIR LTTFDMVKRL IATSEKQLQK ITYDNRNRDQ T

Best Arabidopsis Sequence Match ( AT3G51870.1 )
(BLAST)

001: MEEDRAILTF HRIPSLNSSL ITTSSPAKSG AEQFRRRVLR NPARGDFGLG RFACISLVEK CEQREFAPTT AQLLNNPLAI LALVPKDAAI FAAGALAGAA
101: AKTVTAPLDR IKLLMQTHGI RLGQQSAKKA IGFIEAITLI AKEEGVKGYW KGNLPQVIRV LPYSAVQLLA YESYKNLFKG KDDQLSVIGR LAAGACAGMT
201: STLLTYPLDV LRLRLAVEPG YRTMSQVALS MLRDEGIASF YYGLGPSLVG IAPYIAVNFC IFDLVKKSLP EEYRKKAQSS LLTAVLSAGI ATLTCYPLDT
301: VRRQMQMRGT PYKSIPEAFA GIIDRDGLIG LYRGFLPNAL KTLPNSSIRL TTFDMVKRLI ATSEKQLQKI SDDNRNRDQA Q

Arabidopsis Description

EAACProbable envelope ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O65023]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.