CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	82.74	57.39
CDY07175	Canola	cytosol	96.95	54.57
CDY48505	Canola	cytosol	96.95	54.57
CDX91877	Canola	cytosol	97.46	54.39
CDX74363	Canola	cytosol	96.95	54.11
AT4G01100.2	Thale cress	cytosol	92.89	50.0
CDY11371	Canola	cytosol	85.28	49.56
CDX71722	Canola	cytosol	84.77	49.41
KRH68888	Soybean	cytosol	82.23	46.96
VIT_15s0046g01290.t01	Wine grape	cytosol	84.26	46.89
KRG97138	Soybean	cytosol	81.73	46.67
GSMUA_Achr2P06340_001	Banana	cytosol	84.77	46.65
KRH47947	Soybean	mitochondrion	83.76	46.48
GSMUA_Achr7P24620_001	Banana	cytosol	83.25	45.94
KRH06509	Soybean	cytosol	82.74	45.92
GSMUA_Achr3P32000_001	Banana	cytosol	82.74	45.66
Solyc10g011670.2.1	Tomato	cytosol	82.23	45.63
PGSC0003DMT400049872	Potato	cytosol	82.23	45.63
PGSC0003DMT400000597	Potato	cytosol	81.22	45.07
Solyc01g095570.2.1	Tomato	cytosol	80.71	44.79
EES20024	Sorghum	cytosol	80.71	44.79
HORVU1Hr1G092860.1	Barley	cytosol	80.2	44.63
TraesCS1A01G425000.1	Wheat	cytosol	79.7	44.35
TraesCS1D01G434000.1	Wheat	cytosol	79.7	44.35
TraesCS1B01G459400.1	Wheat	cytosol	79.7	44.35
Os05t0585900-01	Rice	cytosol, mitochondrion	78.68	43.66
CDX68843	Canola	cytosol	24.87	37.4
CDX84024	Canola	cytosol	37.56	22.49
CDX96850	Canola	cytosol	37.56	22.36
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	36.55	22.02
CDY68466	Canola	cytosol	37.06	21.92
CDY67915	Canola	cytosol	27.92	21.83
CDX94361	Canola	cytosol	36.55	21.56
CDY07764	Canola	plastid	36.55	21.18
CDY59491	Canola	cytosol	36.04	20.88
CDY18420	Canola	plastid	35.53	20.29
CDX93344	Canola	plastid	35.53	20.29
CDY40244	Canola	plastid	30.96	18.21
CDX70930	Canola	cytosol	17.77	18.04
CDY13155	Canola	cytosol	31.98	18.0
CDX76183	Canola	cytosol	31.98	18.0
CDY19928	Canola	cytosol	30.46	17.91
CDX85385	Canola	cytosol	30.46	17.8
CDX86261	Canola	cytosol	30.46	17.8
CDX68841	Canola	cytosol	34.01	17.77
CDX75241	Canola	cytoskeleton, cytosol, nucleus	34.01	17.54
CDY56673	Canola	cytosol	29.95	17.4
CDY41199	Canola	plastid	30.96	16.94
CDX70028	Canola	cytosol	33.5	16.62
CDX76755	Canola	cytosol	32.49	16.12
CDY11524	Canola	cytosol	32.49	16.08
CDY11199	Canola	plastid	30.46	14.81
CDX80771	Canola	cytosol, plastid	29.95	14.6
CDY55175	Canola	cytosol	34.52	14.53
CDY23168	Canola	plastid	27.92	14.44
CDY14050	Canola	cytosol	34.01	14.32
CDX71683	Canola	cytosol	36.04	14.2
CDX95305	Canola	plastid	27.41	14.17
CDY25400	Canola	cytosol, plastid	24.87	14.08
CDY29805	Canola	cytosol	24.87	14.08
CDX82257	Canola	cytosol	24.87	14.08
CDY36050	Canola	cytosol, plastid	24.87	14.08
CDY05832	Canola	cytosol	35.53	14.0
CDX68026	Canola	plastid	27.41	13.6
CDX79251	Canola	plastid	27.41	13.57
CDX98981	Canola	endoplasmic reticulum, golgi	28.93	13.38
CDY00231	Canola	cytosol	31.98	13.21
CDX86953	Canola	cytosol	31.98	13.21
CDY31292	Canola	cytosol	21.83	12.29
CDY14527	Canola	plastid	25.89	12.23
CDY08834	Canola	plastid	25.89	12.2
CDY33993	Canola	plastid	20.3	11.2
CDX97455	Canola	plastid	8.12	10.6
CDY39471	Canola	cytosol	10.15	4.99
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	3.05	3.92
CDY66909	Canola	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY01954	EnsemblPlantsGene:GSBRNA2T00113238001	Gene3D:1.50.40.10	GO:A0A078EMK7	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089	PANTHER:PTHR24089:SF623	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	ProteinID:CDY01954
ProteinID:CDY01954.1	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EDCAB9	MapMan:24.2.13	:

Description

BnaC02g27730D

Coordinates

chrLK031930:+:793328..794140

Molecular Weight (calculated)

21683.4 Da

IEP (calculated)

9.647

GRAVY (calculated)

0.094

Length

197 amino acids

Sequence
(BLAST)

001: MSATYPMDMV RGRLAVQTAN SPYQYRGIAH ALSTVVREEG PRALYRGWLP SVIGVVPYVG LNFAVYESLK DWLVKDNPFG LVENNELTII TRLSCGAIAG
101: TVGQTIAYPL DVIRRRMQMV GWKSASSVVT GEGRSKASLE YNGMVDAFRK TVRHEGFGAL YKGLVPNSVK VVPSIAIAFV TYEMVKDVLG VEFRISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.