Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 99.08 | 99.08 |
| CDX96850 | Canola | cytosol | 94.8 | 93.66 |
| CDX84024 | Canola | cytosol | 94.19 | 93.62 |
| AT1G14560.1 | Thale cress | cytosol | 92.35 | 91.24 |
| CDY67915 | Canola | cytosol | 59.33 | 76.98 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 72.78 | 69.19 |
| PGSC0003DMT400021172 | Potato | plastid | 68.2 | 66.37 |
| Solyc08g062860.2.1 | Tomato | cytosol | 68.81 | 65.6 |
| Os01t0571000-02 | Rice | cytosol, peroxisome, plastid | 68.2 | 65.59 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 47.4 | 65.4 |
| TraesCS3A01G206300.1 | Wheat | plastid | 67.58 | 65.19 |
| HORVU3Hr1G049720.4 | Barley | cytosol, peroxisome, plastid | 67.58 | 65.19 |
| TraesCS3D01G209300.1 | Wheat | plastid | 67.58 | 65.19 |
| KRH61524 | Soybean | cytosol | 66.97 | 64.6 |
| KRH52207 | Soybean | cytosol | 66.67 | 64.5 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 66.67 | 64.5 |
| EES00940 | Sorghum | plastid | 66.67 | 64.12 |
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 66.06 | 64.09 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 66.06 | 64.09 |
| Zm00001d011697_P001 | Maize | peroxisome | 64.83 | 63.86 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 65.75 | 63.8 |
| Os01t0708900-01 | Rice | cytosol, extracellular, peroxisome | 65.75 | 63.8 |
| Zm00001d011226_P002 | Maize | plastid | 66.06 | 63.53 |
| EES01355 | Sorghum | extracellular | 64.53 | 62.8 |
| HORVU3Hr1G066850.4 | Barley | mitochondrion | 57.49 | 54.49 |
| CDY68466 | Canola | cytosol | 55.05 | 54.05 |
| CDX94361 | Canola | cytosol | 55.05 | 53.89 |
| CDY01954 | Canola | mitochondrion | 22.02 | 36.55 |
| CDX71722 | Canola | cytosol | 36.39 | 35.21 |
| CDY11371 | Canola | cytosol | 36.39 | 35.1 |
| CDY48505 | Canola | cytosol | 36.39 | 34.0 |
| CDY07175 | Canola | cytosol | 36.39 | 34.0 |
| CDX74363 | Canola | cytosol | 36.7 | 33.99 |
| CDX91877 | Canola | cytosol | 36.7 | 33.99 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 11.93 | 31.97 |
| CDY07764 | Canola | plastid | 33.03 | 31.76 |
| CDY59491 | Canola | cytosol | 32.72 | 31.47 |
| CDX93344 | Canola | plastid | 32.72 | 31.01 |
| CDY18420 | Canola | plastid | 32.42 | 30.72 |
| CDY40244 | Canola | plastid | 31.19 | 30.45 |
| CDX68843 | Canola | cytosol | 11.93 | 29.77 |
| CDX70930 | Canola | cytosol | 17.43 | 29.38 |
| CDY41199 | Canola | plastid | 31.19 | 28.33 |
| CDY13155 | Canola | cytosol | 29.66 | 27.71 |
| CDY19928 | Canola | cytosol | 28.13 | 27.46 |
| CDX76183 | Canola | cytosol | 29.36 | 27.43 |
| CDX85385 | Canola | cytosol | 28.13 | 27.3 |
| CDX86261 | Canola | cytosol | 28.13 | 27.3 |
| CDY56673 | Canola | cytosol | 28.13 | 27.14 |
| CDY23168 | Canola | plastid | 29.36 | 25.2 |
| CDX95305 | Canola | plastid | 29.36 | 25.2 |
| CDX68841 | Canola | cytosol | 28.44 | 24.67 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 28.75 | 24.61 |
| CDX97455 | Canola | plastid | 11.01 | 23.84 |
| CDX80771 | Canola | cytosol, plastid | 29.05 | 23.51 |
| CDY11199 | Canola | plastid | 29.05 | 23.46 |
| CDY29805 | Canola | cytosol | 24.77 | 23.28 |
| CDY25400 | Canola | cytosol, plastid | 24.77 | 23.28 |
| CDX68026 | Canola | plastid | 28.13 | 23.17 |
| CDX76755 | Canola | cytosol | 28.13 | 23.17 |
| CDX79251 | Canola | plastid | 28.13 | 23.12 |
| CDY11524 | Canola | cytosol | 28.13 | 23.12 |
| CDY36050 | Canola | cytosol, plastid | 24.16 | 22.7 |
| CDX82257 | Canola | cytosol | 24.16 | 22.7 |
| CDY31292 | Canola | cytosol | 22.94 | 21.43 |
| CDY00231 | Canola | cytosol | 30.89 | 21.17 |
| CDX70028 | Canola | cytosol | 25.69 | 21.16 |
| CDY55175 | Canola | cytosol | 30.28 | 21.15 |
| CDY14527 | Canola | plastid | 26.91 | 21.1 |
| CDY08834 | Canola | plastid | 26.91 | 21.05 |
| CDX86953 | Canola | cytosol | 30.58 | 20.96 |
| CDY14050 | Canola | cytosol | 29.97 | 20.94 |
| CDX71683 | Canola | cytosol | 29.97 | 19.6 |
| CDY05832 | Canola | cytosol | 29.97 | 19.6 |
| CDY33993 | Canola | plastid | 19.57 | 17.93 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 22.94 | 17.61 |
| CDY39471 | Canola | cytosol | 14.98 | 12.22 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:A0A078I7Y4 | UniProt:A0A078I7Y4 | EnsemblPlants:CDY45268 | ProteinID:CDY45268 |
| ProteinID:CDY45268.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00081710001 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF617 |
| SUPFAM:SSF103506 | UniParc:UPI0004EE56A2 | SEG:seg | : | : | : |
Description
BnaA06g09380DBnaA06g09380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7Y4]
Coordinates
chrLK032619:+:46029..47785
Molecular Weight (calculated)
35789.7 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.023
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSQGSDVM SLVDTLPVLA KTLIAGGAAG AVAKTAVAPL ERIKILLQTR TNDFRSLGLT HSLKKVLQCD GPLGFYKGNG ASVIRIIPYA ALHYMTYEVY
101: RDWILENNLP LGSGPVVDLV AGSAAGGTAV LCTYPLDLAR TKLAYQVSDT GQSFRGGTIG FYRQPACSGI REVLTMAYKE GGPRGLYRGI GPTLIGILPY
201: AGLKFYIYEE LKRHVPEEHQ NSVRMHLPCG ALAGLFGQTL TYPLDVVRRQ MQVENLQPMT NDGSNKRYKN TFDGLNTIVR TQGWRQLFAG LSINYIKIVP
301: SVAIGFAVYE SMKSWLRIPP RERSKPA
101: RDWILENNLP LGSGPVVDLV AGSAAGGTAV LCTYPLDLAR TKLAYQVSDT GQSFRGGTIG FYRQPACSGI REVLTMAYKE GGPRGLYRGI GPTLIGILPY
201: AGLKFYIYEE LKRHVPEEHQ NSVRMHLPCG ALAGLFGQTL TYPLDVVRRQ MQVENLQPMT NDGSNKRYKN TFDGLNTIVR TQGWRQLFAG LSINYIKIVP
301: SVAIGFAVYE SMKSWLRIPP RERSKPA
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.