Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 99.7 | 99.7 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 99.11 | 99.11 |
| Os01t0708900-01 | Rice | cytosol, extracellular, peroxisome | 89.32 | 89.32 |
| Zm00001d011697_P001 | Maize | peroxisome | 86.35 | 87.65 |
| EES01355 | Sorghum | extracellular | 87.24 | 87.5 |
| HORVU3Hr1G066850.4 | Barley | mitochondrion | 84.27 | 82.32 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 50.74 | 72.15 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 69.73 | 69.53 |
| CDX96850 | Canola | cytosol | 65.28 | 66.47 |
| CDX84024 | Canola | cytosol | 64.69 | 66.26 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 64.09 | 66.06 |
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 64.09 | 66.06 |
| Bra016697.1-P | Field mustard | cytosol | 64.69 | 65.86 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 66.77 | 65.41 |
| AT1G14560.1 | Thale cress | cytosol | 63.8 | 64.95 |
| PGSC0003DMT400021172 | Potato | plastid | 63.5 | 63.69 |
| Solyc08g062860.2.1 | Tomato | cytosol | 64.39 | 63.27 |
| KRH61524 | Soybean | cytosol | 61.42 | 61.06 |
| KRH52207 | Soybean | cytosol | 61.13 | 60.95 |
| CDY67915 | Canola | cytosol | 42.43 | 56.75 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 51.34 | 51.64 |
| TraesCS5B01G299100.1 | Wheat | plastid | 40.36 | 42.77 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 33.53 | 31.92 |
| TraesCS4B01G211000.1 | Wheat | plastid | 31.45 | 31.64 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 29.97 | 30.7 |
| TraesCS3B01G211500.1 | Wheat | golgi | 29.97 | 25.96 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 26.11 | 21.36 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 26.41 | 21.19 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 24.63 | 20.49 |
| TraesCS6B01G210000.1 | Wheat | plastid | 25.82 | 20.28 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 22.26 | 20.16 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 22.85 | 20.0 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 24.33 | 19.34 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 28.49 | 18.64 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:Graves_DC | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF463 |
| SUPFAM:SSF103506 | EnsemblPlantsGene:TraesCS3B01G280800 | EnsemblPlants:TraesCS3B01G280800.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:-:451424416..451428625
Molecular Weight (calculated)
36307.5 Da
IEP (calculated)
10.146
GRAVY (calculated)
0.025
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPSQGSAA VAAARVDLCA LDLMPVFAKE MIAGGVAGAF SKTAIAPLER LKILLQTRTN EFRSLGVLKS LNKLRKHDGV LGFYKGNGAS VLRIVPYAAL
101: HYMAYERYRC WILGNCPTLG TGPVVDLLAG SASGGTAVLC TYPLDLARTK LAFQVNNTDQ PSNGLKRPIA PPSYGGIKDV FRGVYSEGGV RALYRGVGPT
201: LMGILPYAGL KFYIYEGLKA HVPEDYKNSV TLKLSCGAAA GLFGQTLTYP LDVVRRQMQV QSHLQHDQSG GPRITGTFQG LKIIKQTQGW RQLFAGLSLN
301: YIKVVPSVAI GFTAYDTMKH LLKIPPRESI KPEQGSA
101: HYMAYERYRC WILGNCPTLG TGPVVDLLAG SASGGTAVLC TYPLDLARTK LAFQVNNTDQ PSNGLKRPIA PPSYGGIKDV FRGVYSEGGV RALYRGVGPT
201: LMGILPYAGL KFYIYEGLKA HVPEDYKNSV TLKLSCGAAA GLFGQTLTYP LDVVRRQMQV QSHLQHDQSG GPRITGTFQG LKIIKQTQGW RQLFAGLSLN
301: YIKVVPSVAI GFTAYDTMKH LLKIPPRESI KPEQGSA
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.