Factsheet for TraesCS5B01G299100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G306500.1	Wheat	plastid	89.94	95.02
TraesCS5A01G301600.1	Wheat	plastid	89.62	86.89
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	31.76	42.62
TraesCS3B01G280800.1	Wheat	cytosol, mitochondrion, plastid	42.77	40.36
TraesCS6B01G231800.3	Wheat	cytosol	38.05	36.12
TraesCS1B01G459400.1	Wheat	cytosol	33.02	29.66
TraesCS4B01G211000.1	Wheat	plastid	28.62	27.16
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	27.67	26.75
TraesCS3B01G211500.1	Wheat	golgi	27.99	22.88
TraesCS1B01G135400.1	Wheat	cytosol	27.99	21.6
TraesCS6B01G210000.1	Wheat	plastid	28.3	20.98
TraesCS7B01G401600.1	Wheat	cytosol	27.04	20.28
TraesCS4B01G306400.1	Wheat	peroxisome	26.1	19.76
TraesCS7B01G138400.1	Wheat	cytosol	22.33	19.09
TraesCS3B01G493000.1	Wheat	cytosol	23.9	18.77
TraesCS5B01G274300.1	Wheat	cytosol	22.64	18.7
TraesCS7B01G278000.1	Wheat	cytosol, plastid	28.62	17.67

Protein Annotations

EnsemblPlants:TraesCS5B01G299100.1	EnsemblPlantsGene:TraesCS5B01G299100	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF245	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
TMHMM:TMhelix	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:482417184..482418378

Molecular Weight (calculated)

32732.9 Da

IEP (calculated)

10.969

GRAVY (calculated)

0.143

Length

318 amino acids

Sequence
(BLAST)

001: MADPTPTPTR AGTRTSRMAE RSGVMFDTAL ASTPAYAREM LAGGVAGVLA KTSVASLGRV KLLRRMGGEP GGVGAVRTLV GIYRREGVAG LYRGNGTNAL
101: RVFPSKALHF AAYERYRGWL LAGSAAPSSS VVDLLAGSAA GGTALLATYP LDLARARLAS GDAARTSVHG VLRAAYAEGG GVRGLYRGAC PALARALPRA
201: GIKFGAYEWL KLRLPEGYDG RADAQLACGV AAAQLASTAT YPLGVVRRRM QLGLATGGVL QGVRATAREE GVRRLYAGLG IAYVKAVPAA AIGLVAYDQM
301: KLLLKLAAGG HGESVHAP

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.