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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 16481623
plastid: 16595579
plastid: 18419817
golgi: 23128297
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 18419817 doi
FM Dupont
Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.
msms PMID: 16595579 doi
Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman
Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
msms PMID: 16481623 doi
Y Balmer, WH Vensel, N Cai, W Manieri, P Schürmann, WJ Hurkman, BB Buchanan
Department of Plant and Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G175100.1 Wheat plastid 98.37 97.46
TraesCS6D01G168200.1 Wheat golgi 97.2 97.2
Os02t0202400-01 Rice plastid 75.52 76.24
EES04720 Sorghum plastid 69.93 68.97
Zm00001d015746_P001 Maize plastid 69.93 68.65
KRH15889 Soybean endoplasmic reticulum 37.06 66.53
GSMUA_Achr7P10070_001 Banana cytosol 57.11 63.47
CDX68843 Canola cytosol 19.35 63.36
GSMUA_Achr6P05150_001 Banana cytosol, plastid, vacuole 55.94 59.7
TraesCS7B01G401600.1 Wheat cytosol 57.34 58.02
VIT_04s0008g05240.t01 Wine grape cytosol 53.15 57.43
PGSC0003DMT400053564 Potato cytosol, nucleus, plastid 52.68 56.78
CDX68841 Canola cytosol 49.65 56.5
TraesCS1B01G135400.1 Wheat cytosol 54.08 56.31
CDX75241 Canola cytoskeleton, cytosol, nucleus 50.12 56.28
Solyc08g061090.2.1 Tomato plastid 52.21 56.28
GSMUA_Achr7P10000_001 Banana mitochondrion 30.54 56.22
Bra011344.1-P Field mustard cytosol 49.88 56.02
KRH52458 Soybean extracellular 51.05 56.01
VIT_11s0016g05110.t01 Wine grape cytosol 51.98 55.75
Bra007793.1-P Field mustard cytosol 51.52 55.53
CDY11524 Canola cytosol 51.52 55.53
CDX76755 Canola cytosol 51.28 55.42
KRH61786 Soybean cytosol, nucleus, plastid 50.12 54.99
KRH03708 Soybean cytosol, mitochondrion, nucleus, plastid 52.21 54.77
AT4G32400.1 Thale cress cytosol 49.18 53.83
KRH05133 Soybean mitochondrion 51.05 52.39
GSMUA_Achr10P... Banana endoplasmic reticulum 52.45 50.34
TraesCS7B01G138400.1 Wheat cytosol 29.6 34.14
TraesCS5B01G274300.1 Wheat cytosol 29.84 33.25
TraesCS1B01G459400.1 Wheat cytosol 25.17 30.51
TraesCS3B01G070700.1 Wheat cytosol, mitochondrion, peroxisome 23.08 30.09
TraesCS6B01G231800.3 Wheat cytosol 22.14 28.36
TraesCS5B01G299100.1 Wheat plastid 20.98 28.3
TraesCS3B01G238400.1 Wheat cytosol, plastid, vacuole 15.62 28.27
TraesCS4B01G211000.1 Wheat plastid 21.91 28.06
TraesCS4B01G306400.1 Wheat peroxisome 25.87 26.43
TraesCS3B01G280800.1 Wheat cytosol, mitochondrion, plastid 20.28 25.82
TraesCS3B01G493000.1 Wheat cytosol 21.68 22.96
TraesCS7B01G278000.1 Wheat cytosol, plastid 26.81 22.33
TraesCS3B01G211500.1 Wheat golgi 20.05 22.11
Protein Annotations
EnsemblPlants:TraesCS6B01G210000.1EnsemblPlantsGene:TraesCS6B01G210000Gene3D:1.50.40.10GO:GO:0006810GO:GO:0008150GO:GO:0055085
InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPANTHER:PTHR24089
PANTHER:PTHR24089:SF281PFAM:PF00153PFscan:PS50920PRINTS:PR00926SEG:segSUPFAM:SSF103506
MapMan:24.2.13:::::
Description
No Description!
Coordinates
chr6B:-:276745218..276747591
Molecular Weight (calculated)
45896.7 Da
IEP (calculated)
10.141
GRAVY (calculated)
-0.128
Length
429 amino acids
Sequence
(BLAST)
001: MAAAMAATTM VTKNNRASLA MDKKNWFLRP VPEVAFPWSS QPESRSLDFP RRALFASVGL SLSHGAPPVA REHDGKARPA DDVAHQLAAA GEAGVQKAQK
101: AKKAKKQQLG LRKVRVKIGN PHLRRLVSGA IAGAVSRTFV APLETIRTHL MVGSSGADSM AGVFRWIMRT EGWPGLFRGN AVNVLRVAPS KAIEHFTYDT
201: AKKYLTPEAG EPAKVPIPTP LVAGALAGVA STLCTYPMEL VKTRLTIEKD VYDNLLHAFV KIVRDEGPGE LYRGLAPSLI GVVPYAAANF YAYETLRGVY
301: RRASGKEEVG NVPTLLIGSA AGAIASTATF PLEVARKQMQ VGAVGGRQVY KNVLHAMYCI LKKEGAAGLY RGLGPSCIKL MPAAGISFMC YEACKKILVD
401: DKEDEPQEET ETGQAGGQAA PKSSSGDRP
Best Arabidopsis Sequence Match ( AT3G20240.1 )
(BLAST)
001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI
Arabidopsis Description
Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.