Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
16481623
plastid: 16595579 plastid: 18419817 golgi: 23128297 unclear: 25769308 |
msms PMID:
25769308
doi
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID:
18419817
doi
Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.
msms PMID:
16595579
doi
Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G175100.1 | Wheat | plastid | 98.37 | 97.46 |
TraesCS6D01G168200.1 | Wheat | golgi | 97.2 | 97.2 |
Os02t0202400-01 | Rice | plastid | 75.52 | 76.24 |
EES04720 | Sorghum | plastid | 69.93 | 68.97 |
Zm00001d015746_P001 | Maize | plastid | 69.93 | 68.65 |
KRH15889 | Soybean | endoplasmic reticulum | 37.06 | 66.53 |
GSMUA_Achr7P10070_001 | Banana | cytosol | 57.11 | 63.47 |
CDX68843 | Canola | cytosol | 19.35 | 63.36 |
GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 55.94 | 59.7 |
TraesCS7B01G401600.1 | Wheat | cytosol | 57.34 | 58.02 |
VIT_04s0008g05240.t01 | Wine grape | cytosol | 53.15 | 57.43 |
PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 52.68 | 56.78 |
CDX68841 | Canola | cytosol | 49.65 | 56.5 |
TraesCS1B01G135400.1 | Wheat | cytosol | 54.08 | 56.31 |
CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 50.12 | 56.28 |
Solyc08g061090.2.1 | Tomato | plastid | 52.21 | 56.28 |
GSMUA_Achr7P10000_001 | Banana | mitochondrion | 30.54 | 56.22 |
Bra011344.1-P | Field mustard | cytosol | 49.88 | 56.02 |
KRH52458 | Soybean | extracellular | 51.05 | 56.01 |
VIT_11s0016g05110.t01 | Wine grape | cytosol | 51.98 | 55.75 |
Bra007793.1-P | Field mustard | cytosol | 51.52 | 55.53 |
CDY11524 | Canola | cytosol | 51.52 | 55.53 |
CDX76755 | Canola | cytosol | 51.28 | 55.42 |
KRH61786 | Soybean | cytosol, nucleus, plastid | 50.12 | 54.99 |
KRH03708 | Soybean | cytosol, mitochondrion, nucleus, plastid | 52.21 | 54.77 |
AT4G32400.1 | Thale cress | cytosol | 49.18 | 53.83 |
KRH05133 | Soybean | mitochondrion | 51.05 | 52.39 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 52.45 | 50.34 |
TraesCS7B01G138400.1 | Wheat | cytosol | 29.6 | 34.14 |
TraesCS5B01G274300.1 | Wheat | cytosol | 29.84 | 33.25 |
TraesCS1B01G459400.1 | Wheat | cytosol | 25.17 | 30.51 |
TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 23.08 | 30.09 |
TraesCS6B01G231800.3 | Wheat | cytosol | 22.14 | 28.36 |
TraesCS5B01G299100.1 | Wheat | plastid | 20.98 | 28.3 |
TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 15.62 | 28.27 |
TraesCS4B01G211000.1 | Wheat | plastid | 21.91 | 28.06 |
TraesCS4B01G306400.1 | Wheat | peroxisome | 25.87 | 26.43 |
TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 20.28 | 25.82 |
TraesCS3B01G493000.1 | Wheat | cytosol | 21.68 | 22.96 |
TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 26.81 | 22.33 |
TraesCS3B01G211500.1 | Wheat | golgi | 20.05 | 22.11 |
Protein Annotations
EnsemblPlants:TraesCS6B01G210000.1 | EnsemblPlantsGene:TraesCS6B01G210000 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
PANTHER:PTHR24089:SF281 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:276745218..276747591
Molecular Weight (calculated)
45896.7 Da
IEP (calculated)
10.141
GRAVY (calculated)
-0.128
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMAATTM VTKNNRASLA MDKKNWFLRP VPEVAFPWSS QPESRSLDFP RRALFASVGL SLSHGAPPVA REHDGKARPA DDVAHQLAAA GEAGVQKAQK
101: AKKAKKQQLG LRKVRVKIGN PHLRRLVSGA IAGAVSRTFV APLETIRTHL MVGSSGADSM AGVFRWIMRT EGWPGLFRGN AVNVLRVAPS KAIEHFTYDT
201: AKKYLTPEAG EPAKVPIPTP LVAGALAGVA STLCTYPMEL VKTRLTIEKD VYDNLLHAFV KIVRDEGPGE LYRGLAPSLI GVVPYAAANF YAYETLRGVY
301: RRASGKEEVG NVPTLLIGSA AGAIASTATF PLEVARKQMQ VGAVGGRQVY KNVLHAMYCI LKKEGAAGLY RGLGPSCIKL MPAAGISFMC YEACKKILVD
401: DKEDEPQEET ETGQAGGQAA PKSSSGDRP
101: AKKAKKQQLG LRKVRVKIGN PHLRRLVSGA IAGAVSRTFV APLETIRTHL MVGSSGADSM AGVFRWIMRT EGWPGLFRGN AVNVLRVAPS KAIEHFTYDT
201: AKKYLTPEAG EPAKVPIPTP LVAGALAGVA STLCTYPMEL VKTRLTIEKD VYDNLLHAFV KIVRDEGPGE LYRGLAPSLI GVVPYAAANF YAYETLRGVY
301: RRASGKEEVG NVPTLLIGSA AGAIASTATF PLEVARKQMQ VGAVGGRQVY KNVLHAMYCI LKKEGAAGLY RGLGPSCIKL MPAAGISFMC YEACKKILVD
401: DKEDEPQEET ETGQAGGQAA PKSSSGDRP
001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI
Arabidopsis Description
Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.