Factsheet for TraesCS6A01G175100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 24136528
golgi: 25769308

msms PMID: 24136528 doi

A Nozawa, Y Tozawa

Cell-Free Science and Technology Research Center, Ehime University, Matsuyama, Ehime, Japan.

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G210000.1	Wheat	plastid	97.46	98.37
TraesCS6D01G168200.1	Wheat	golgi	96.07	96.97
TraesCS7A01G495700.1	Wheat	cytosol, plastid	37.41	76.78
Os02t0202400-01	Rice	plastid	74.83	76.24
EES04720	Sorghum	plastid	68.82	68.51
Zm00001d015746_P001	Maize	plastid	69.05	68.42
KRH15889	Soybean	endoplasmic reticulum	36.95	66.95
CDX68843	Canola	cytosol	19.4	64.12
GSMUA_Achr7P10070_001	Banana	cytosol	56.35	63.21
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	55.2	59.45
TraesCS1A01G115500.1	Wheat	golgi	54.97	57.63
VIT_04s0008g05240.t01	Wine grape	cytosol	52.42	57.18
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	52.19	56.78
Solyc08g061090.2.1	Tomato	plastid	51.73	56.28
CDX68841	Canola	cytosol	48.96	56.23
GSMUA_Achr7P10000_001	Banana	mitochondrion	30.25	56.22
CDX75241	Canola	cytoskeleton, cytosol, nucleus	49.42	56.02
Bra011344.1-P	Field mustard	cytosol	49.19	55.76
KRH52458	Soybean	extracellular	50.35	55.75
VIT_11s0016g05110.t01	Wine grape	cytosol	51.5	55.75
Bra007793.1-P	Field mustard	cytosol	50.81	55.28
CDY11524	Canola	cytosol	50.81	55.28
CDX76755	Canola	cytosol	50.58	55.16
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	51.73	54.77
KRH61786	Soybean	cytosol, nucleus, plastid	49.42	54.73
AT4G32400.1	Thale cress	cytosol	48.5	53.57
KRH05133	Soybean	mitochondrion	50.58	52.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum	51.96	50.34
TraesCS7A01G252500.1	Wheat	cytosol	29.79	35.05
TraesCS5A01G277400.1	Wheat	mitochondrion	20.55	33.71
TraesCS5A01G274600.1	Wheat	cytosol, plastid	29.56	33.42
TraesCS1A01G425000.1	Wheat	cytosol	24.94	30.51
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	22.86	30.09
TraesCS6A01G187900.2	Wheat	cytosol	21.71	28.06
TraesCS5A01G301600.1	Wheat	plastid	21.25	28.05
TraesCS4A01G093400.1	Wheat	cytosol	21.94	27.78
TraesCS7A01G061900.2	Wheat	cytosol	21.25	27.46
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	21.25	27.38
TraesCS3A01G206300.1	Wheat	plastid	21.25	27.14
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	25.87	26.48
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	20.09	25.82
TraesCS4A01G428000.1	Wheat	mitochondrion	21.25	23.9
TraesCS4A01G427000.1	Wheat	mitochondrion	19.86	22.99
TraesCS7A01G376600.1	Wheat	cytosol, plastid	26.79	22.31
TraesCS3A01G181500.1	Wheat	golgi	20.09	22.19

Protein Annotations

EnsemblPlants:TraesCS6A01G175100.1	EnsemblPlantsGene:TraesCS6A01G175100	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF281	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
MapMan:24.2.13	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:189920981..189922459

Molecular Weight (calculated)

46249.1 Da

IEP (calculated)

10.033

GRAVY (calculated)

-0.125

Length

433 amino acids

Sequence
(BLAST)

001: MAAAMAATTM VTKNNRASLV MDKKNWLLRP VPEVAFPWSS QPESRSLDFP RRALFASVGL SLSHGAPPVA REHDGKARPA DDVAHQLAAA GEAGVQKAQK
101: AKKAKKQQLS LRKVRVKIGN PHLRRLVSGA IAGAVSRTFV APLETIRTHL MVGSSGADSM AGVFRWIMRT EGWPGLFRGN AVNVLRVAPS KAIEHFTYDT
201: AKKYLTPEAG EPAKVPIPTP LVAGALAGVA STLCTYPMEL VKTRLTIEKD VYDNLLHAFV KIVRDEGPGE LYRGLAPSLI GVVPYAAANF YAYETLRGVY
301: RRASGKEEVG NVPTLLIGSA AGAIASTATF PLEVARKQMQ VGAVGGRQVY KNVLHAMYCI LEKEGTAGLY RGLGPSCIKL MPAAGISFMC YEACKKILVD
401: EKEDGGAAEP QEETETGQAG GQAAPKSSNG DRP

Best Arabidopsis Sequence Match ( AT3G20240.1 )
(BLAST)

001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.