Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G176300.3 | Wheat | cytosol | 98.81 | 98.81 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 98.21 | 98.21 |
| HORVU6Hr1G042080.7 | Barley | cytosol | 96.12 | 95.83 |
| TraesCS7A01G061900.2 | Wheat | cytosol | 91.64 | 91.64 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 85.37 | 85.12 |
| Zm00001d016299_P001 | Maize | cytosol, mitochondrion, plastid | 84.48 | 84.48 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 89.25 | 77.66 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 76.42 | 71.71 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 78.81 | 70.59 |
| GSMUA_Achr10P... | Banana | cytosol | 72.84 | 70.32 |
| Solyc12g008770.1.1 | Tomato | extracellular | 68.06 | 67.46 |
| VIT_11s0016g02470.t01 | Wine grape | cytosol | 68.36 | 67.16 |
| PGSC0003DMT400000910 | Potato | cytosol | 68.36 | 66.96 |
| KRH49045 | Soybean | cytosol | 63.58 | 65.94 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 66.57 | 64.45 |
| AT4G26180.1 | Thale cress | cytosol | 63.58 | 64.35 |
| Bra026457.1-P | Field mustard | cytosol | 63.88 | 64.07 |
| CDX94361 | Canola | cytosol | 63.88 | 64.07 |
| CDY68466 | Canola | cytosol | 63.58 | 63.96 |
| TraesCS3A01G206300.1 | Wheat | plastid | 55.22 | 54.57 |
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 51.34 | 51.04 |
| TraesCS5A01G277400.1 | Wheat | mitochondrion | 34.03 | 43.18 |
| TraesCS5A01G301600.1 | Wheat | plastid | 36.42 | 37.2 |
| TraesCS1A01G425000.1 | Wheat | cytosol | 35.22 | 33.33 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 20.0 | 31.75 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 28.66 | 29.18 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 29.55 | 28.95 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 26.87 | 26.79 |
| TraesCS3A01G181500.1 | Wheat | golgi | 28.96 | 24.74 |
| TraesCS1A01G115500.1 | Wheat | golgi | 27.76 | 22.52 |
| TraesCS6A01G175100.1 | Wheat | plastid | 28.06 | 21.71 |
| TraesCS4A01G407200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 26.57 | 21.04 |
| TraesCS7A01G252500.1 | Wheat | cytosol | 22.99 | 20.92 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 30.15 | 19.42 |
| TraesCS5A01G274600.1 | Wheat | cytosol, plastid | 22.09 | 19.32 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:Graves_DC | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF245 |
| SUPFAM:SSF103506 | EnsemblPlantsGene:TraesCS6A01G187900 | EnsemblPlants:TraesCS6A01G187900.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6A:+:226067107..226070901
Molecular Weight (calculated)
36464.5 Da
IEP (calculated)
10.039
GRAVY (calculated)
0.068
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAERGGGA LPLAVRELIA GGVAGGVARS AVAPLERVKI LLQTRRAEFR GSGLVGSFRT IYQTEGPLGF YRGNGASIAR IVPYAALHYM AYEEYRRWII
101: LGFPNVEQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNL SLRESKPSEQ VYKGILDCVK TIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRKDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA FSLSNLVKGK GTFGSLVMIA KHQGWKQLFS GLSINYLKVV PSVAIGFTVY
301: DSMKDWLNVP SREQAAVVVP VLSEDGSNAA PVHSS
101: LGFPNVEQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNL SLRESKPSEQ VYKGILDCVK TIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRKDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA FSLSNLVKGK GTFGSLVMIA KHQGWKQLFS GLSINYLKVV PSVAIGFTVY
301: DSMKDWLNVP SREQAAVVVP VLSEDGSNAA PVHSS
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.