CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	97.62	97.91
TraesCS6D01G176300.3	Wheat	cytosol	86.31	86.57
TraesCS6B01G231800.3	Wheat	cytosol	85.42	85.67
TraesCS6A01G187900.2	Wheat	cytosol	85.12	85.37
HORVU6Hr1G042080.7	Barley	cytosol	84.82	84.82
TraesCS7A01G061900.2	Wheat	cytosol	80.95	81.19
TraesCS7D01G056700.1	Wheat	cytosol	82.74	81.05
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	76.79	72.27
GSMUA_Achr10P...	Banana	cytosol	73.21	70.89
TraesCS4A01G428000.1	Wheat	mitochondrion	79.46	69.35
VIT_11s0016g02470.t01	Wine grape	cytosol	68.45	67.45
KRH49045	Soybean	cytosol	64.29	66.87
AT4G26180.1	Thale cress	cytosol	65.77	66.77
CDY68466	Canola	cytosol	65.77	66.37
Solyc12g008770.1.1	Tomato	extracellular	66.67	66.27
Bra026457.1-P	Field mustard	cytosol	65.77	66.17
CDX94361	Canola	cytosol	65.77	66.17
PGSC0003DMT400000910	Potato	cytosol	67.26	66.08
TraesCS4A01G427000.1	Wheat	mitochondrion	73.51	66.04
GSMUA_Achr7P09310_001	Banana	cytosol	65.77	63.87
EES00940	Sorghum	plastid	54.46	53.82
EES01355	Sorghum	extracellular	52.08	52.08
EES20024	Sorghum	cytosol	34.52	32.68
EES00336	Sorghum	cytosol	30.95	31.52
OQU92863	Sorghum	cytosol	30.65	29.77
OQU92679	Sorghum	cytosol	10.42	28.23
KXG34072	Sorghum	cytosol	26.79	26.24
EES02734	Sorghum	mitochondrion	29.46	24.75
EER90006	Sorghum	plastid	28.27	22.57
EES17800	Sorghum	cytosol	27.98	22.43
EES04720	Sorghum	plastid	28.27	21.84
KXG39987	Sorghum	peroxisome	27.08	21.21
EER96987	Sorghum	cytosol	22.92	20.53
EER97679	Sorghum	cytosol	22.02	20.16
EES15354	Sorghum	cytosol	22.02	19.37
EER88619	Sorghum	cytosol, plastid	29.17	18.92
KXG29744	Sorghum	plastid	29.46	18.75

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8073790	UniProt:A0A194YNR8	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0008150	GO:GO:0015228	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:1990559	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG29836	ProteinID:KXG29836	ProteinID:KXG29836.1
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF245	EnsemblPlantsGene:SORBI_3004G097400	SUPFAM:SSF103506	unigene:Sbi.16458	UniParc:UPI0007F23619
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:8643582..8649784

Molecular Weight (calculated)

36710.8 Da

IEP (calculated)

10.049

GRAVY (calculated)

0.040

Length

336 amino acids

Sequence
(BLAST)

001: MDARAREAAE GTSGPGLPLA VRELLAGGVA GGVAKTAVAP LERVKILFQT RRAEFRGSGL IGSFRTIYRT EGLLGFYRGN GASVARIVPY AALHYMAYEE
101: YRRWIILGFP NVEQGPVLDL VAGSIAGGTA VICTYPLDLV RTKLAYQVKG AVNVGFRESK PSEQVYKGIM DCVKTIYRQN GLKGIYRGMA PSLYGIFPYS
201: GLKFYFYEKM KSHVPEEHRK DIIAKLGCGS VAGLLGQTIT YPLDVVRRQM QVQALSSSSL VGRGTFESLV MIAKQQGWRQ LFSGLSINYL KVVPSVAIGF
301: TVYDSMKVWL KVPSREDTAV AVLTDERSNT APIPSS

Best Arabidopsis Sequence Match ( AT4G26180.1 )
(BLAST)

001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T

Arabidopsis Description

COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.