CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039884_P002	Maize	cytosol	93.64	94.21
Os01t0143100-01	Rice	mitochondrion	88.18	90.37
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	82.73	82.98
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	82.73	82.98
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	82.73	82.98
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	83.03	73.66
KRH73096	Soybean	cytosol	66.06	66.67
OQU92863	Sorghum	cytosol	68.79	65.61
VIT_08s0007g01280.t01	Wine grape	cytosol	66.67	65.48
KRH49196	Soybean	endoplasmic reticulum	54.55	65.45
OQU92679	Sorghum	cytosol	24.55	65.32
KRH15037	Soybean	cytosol	64.24	65.03
KRH00061	Soybean	cytosol	64.85	64.46
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	64.55	63.96
VIT_13s0019g02440.t01	Wine grape	cytosol	67.58	61.77
PGSC0003DMT400062351	Potato	cytosol	65.45	61.36
AT3G55640.4	Thale cress	plastid	61.21	60.84
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	65.15	60.56
CDY40244	Canola	plastid	60.3	59.4
CDY07764	Canola	plastid	59.39	57.65
Bra000026.1-P	Field mustard	plastid	59.39	57.65
CDX76183	Canola	cytosol	60.61	57.14
CDY13155	Canola	cytosol	60.61	57.14
CDY59491	Canola	cytosol	58.79	57.06
AT3G53940.1	Thale cress	cytosol	62.12	56.16
Bra014855.1-P	Field mustard	cytosol	60.91	56.15
Bra007181.1-P	Field mustard	plastid	60.3	55.9
CDY41199	Canola	plastid	60.3	55.28
Bra017151.1-P	Field mustard	plastid	56.97	54.49
CDX93344	Canola	plastid	56.97	54.49
CDY18420	Canola	plastid	56.97	54.49
AT2G37890.1	Thale cress	cytosol	55.45	54.3
KXG29836	Sorghum	cytosol, mitochondrion, plastid	31.52	30.95
EES00940	Sorghum	plastid	30.61	29.71
EES20024	Sorghum	cytosol	31.82	29.58
EES01355	Sorghum	extracellular	29.09	28.57
KXG34072	Sorghum	cytosol	25.15	24.2
EES02734	Sorghum	mitochondrion	28.18	23.25
EER97679	Sorghum	cytosol	24.24	21.8
EER90006	Sorghum	plastid	27.58	21.62
EES04720	Sorghum	plastid	28.48	21.61
EER96987	Sorghum	cytosol	23.94	21.07
KXG29744	Sorghum	plastid	33.64	21.02
EER88619	Sorghum	cytosol, plastid	32.73	20.85
EES17800	Sorghum	cytosol	25.76	20.29
EES15354	Sorghum	cytosol	22.73	19.63
KXG39987	Sorghum	peroxisome	25.15	19.35

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8073320	UniProt:C5XQ35	EnsemblPlants:EES00336	ProteinID:EES00336
ProteinID:EES00336.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	EnsemblPlantsGene:SORBI_3003G075500	SUPFAM:SSF103506	UniParc:UPI0001A84777	RefSeq:XP_002455216.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:6400753..6404549

Molecular Weight (calculated)

35446.7 Da

IEP (calculated)

10.046

GRAVY (calculated)

0.063

Length

330 amino acids

Sequence
(BLAST)

001: MQTEARVGVV VDGGGGGAGA AVGRCQRQRH ISTAGHLAAG GFAGAVSKTC TAPLARLTIL FQVAGMHSDV ATVRKYSIWH EASRIFREEG FGAFWKGNLV
101: TIVHRLPYSA ISFYSYERYK NLLQTVPVLD RDSNNVGVVR LLGGGLAGIT AASLTYPLDV VRTRLATQKT TRYYKGIFHA VSTICRDEGI KGLYKGIGAT
201: LLGVGPSIAI SFSVYESLRS HWQMERPHDS TAVVSLFSGS LSGIASSTAT FPLDLVKRRM QLQGAAGTAS VQKSTITGTI RDILQKEGLR GFYRGIAPEY
301: LKVVPSVGIA FMTYETLKSL LSSIDTDDES

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.