CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011226_P002	Maize	plastid	96.76	96.76
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	91.76	91.76
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	90.29	90.56
TraesCS3D01G209300.1	Wheat	plastid	90.0	90.27
TraesCS3A01G206300.1	Wheat	plastid	89.71	89.97
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	61.18	87.76
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	76.76	77.22
EES01355	Sorghum	extracellular	73.24	74.11
VIT_04s0008g01060.t01	Wine grape	cytosol	70.29	69.48
CDX84024	Canola	cytosol	65.88	68.09
CDX96850	Canola	cytosol	66.18	67.98
Bra016697.1-P	Field mustard	cytosol	65.59	67.37
PGSC0003DMT400021172	Potato	plastid	66.47	67.26
AT1G14560.1	Thale cress	cytosol	65.29	67.07
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.12	66.67
Solyc08g062860.2.1	Tomato	cytosol	67.06	66.47
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	63.53	66.06
KRH52207	Soybean	cytosol	62.65	63.02
KRH61524	Soybean	cytosol	62.65	62.83
CDY67915	Canola	cytosol	41.47	55.95
KXG29836	Sorghum	cytosol, mitochondrion, plastid	53.82	54.46
EES20024	Sorghum	cytosol	35.59	34.08
EES00336	Sorghum	cytosol	29.71	30.61
OQU92863	Sorghum	cytosol	30.59	30.06
OQU92679	Sorghum	cytosol	10.29	28.23
EES02734	Sorghum	mitochondrion	30.59	26.0
KXG34072	Sorghum	cytosol	24.41	24.2
EER97679	Sorghum	cytosol	25.0	23.16
EER96987	Sorghum	cytosol	25.0	22.67
EES17800	Sorghum	cytosol	27.35	22.2
EES04720	Sorghum	plastid	27.65	21.61
EER90006	Sorghum	plastid	25.88	20.9
KXG39987	Sorghum	peroxisome	25.88	20.51
EES15354	Sorghum	cytosol	22.94	20.42
KXG29744	Sorghum	plastid	28.82	18.56
EER88619	Sorghum	cytosol, plastid	28.24	18.53

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8078205	UniProt:C5XNR7	EnsemblPlants:EES00940	ProteinID:EES00940
ProteinID:EES00940.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0015217	GO:GO:0015228	GO:GO:0015866	GO:GO:0016020	GO:GO:0016021	GO:GO:0035349
GO:GO:0055085	GO:GO:0080121	GO:GO:0080122	InterPro:Graves_DC	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00928
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF617	EnsemblPlantsGene:SORBI_3003G194100	SUPFAM:SSF103506	UniParc:UPI0001A84885
RefSeq:XP_002455820.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:51675876..51679461

Molecular Weight (calculated)

36776.5 Da

IEP (calculated)

9.894

GRAVY (calculated)

0.020

Length

340 amino acids

Sequence
(BLAST)

001: MGSSQESTFS SASAAAQVNA SALDLLPVYA KELIAGGAAG AFAKTAVAPL ERVKILLQTR TEGFQSLGIL QSLRKLWQYE GIRGFYKGNG ASVLRIVPYA
101: ALHYMTYEQY RCWILNNFAP SIGTGPVVDL LAGSAAGGTA VLCTYPLDLA RTKLAYQVSN VGQPGNAFGN SGQQQTYNGI KDVFKTVYKE GGARSLYRGV
201: GPTLIGILPY AGLKFYIYED LKSQVPEDYK NSVILKLSCG ALAGLFGQTL TYPLDVVRRQ MQVQSKQPQN SSDGFRIRGT FQGLLLIIHC QGWRQLFAGL
301: SLNYVKVVPS VAIGFTTYDM MKTLLGVPPR ERVHASGGNK

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.