Factsheet for Bra026206.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	99.08	99.08
Bra016697.1-P	Field mustard	cytosol	93.88	92.75
AT1G14560.1	Thale cress	cytosol	91.74	90.63
CDY67915	Canola	cytosol	59.02	76.59
VIT_04s0008g01060.t01	Wine grape	cytosol	72.17	68.6
PGSC0003DMT400021172	Potato	plastid	67.58	65.77
Solyc08g062860.2.1	Tomato	cytosol	68.5	65.31
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	67.58	65.0
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	47.09	64.98
TraesCS3A01G206300.1	Wheat	plastid	66.97	64.6
TraesCS3D01G209300.1	Wheat	plastid	66.97	64.6
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	66.97	64.6
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	66.06	64.09
TraesCS3B01G280800.1	Wheat	cytosol, mitochondrion, plastid	66.06	64.09
KRH61524	Soybean	cytosol	66.36	64.01
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	66.06	63.91
KRH52207	Soybean	cytosol	66.06	63.91
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	65.75	63.8
EES00940	Sorghum	plastid	66.06	63.53
Zm00001d011697_P001	Maize	peroxisome	64.22	63.25
Os01t0708900-01	Rice	cytosol, extracellular, peroxisome	65.14	63.2
Zm00001d011226_P002	Maize	plastid	65.44	62.94
EES01355	Sorghum	extracellular	63.91	62.2
HORVU3Hr1G066850.4	Barley	mitochondrion	57.8	54.78
Bra026457.1-P	Field mustard	cytosol	54.74	53.59
Bra007623.1-P	Field mustard	cytosol	36.39	35.1
Bra037383.1-P	Field mustard	cytosol	36.39	34.0
Bra000944.1-P	Field mustard	cytosol	36.7	33.99
Bra000026.1-P	Field mustard	plastid	32.72	31.47
Bra017151.1-P	Field mustard	plastid	32.42	30.72
Bra007181.1-P	Field mustard	plastid	30.89	28.37
Bra036153.1-P	Field mustard	cytosol	27.22	26.57
Bra014855.1-P	Field mustard	cytosol	29.05	26.54
Bra031891.1-P	Field mustard	cytosol	21.41	25.93
Bra033473.1-P	Field mustard	plastid	29.05	24.93
Bra011344.1-P	Field mustard	cytosol	28.44	24.35
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	22.32	23.78
Bra005684.1-P	Field mustard	plastid	29.36	23.76
Bra035801.1-P	Field mustard	cytosol	24.77	23.28
Bra003653.1-P	Field mustard	plastid	27.83	22.92
Bra007793.1-P	Field mustard	cytosol	27.83	22.86
Bra001780.1-P	Field mustard	cytosol	18.04	21.45
Bra019615.1-P	Field mustard	cytosol	30.58	20.96
Bra028702.1-P	Field mustard	cytosol	29.97	20.94
Bra024342.1-P	Field mustard	plastid	26.3	20.57
Bra035722.1-P	Field mustard	cytosol	29.66	19.44
Bra009271.1-P	Field mustard	cytosol	25.08	19.03

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra026206	EnsemblPlants:Bra026206.1	EnsemblPlants:Bra026206.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4EBP7	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF617	SUPFAM:SSF103506	UniParc:UPI000253EF3A
SEG:seg	:	:	:	:	:

Description

AT1G14560 (E=3e-164) | mitochondrial substrate carrier family protein

Coordinates

chrA06:+:5580585..5582270

Molecular Weight (calculated)

35703.6 Da

IEP (calculated)

9.892

GRAVY (calculated)

0.009

Length

327 amino acids

Sequence
(BLAST)

001: MVSSQGSDVM SLVDTLPVLA KTLIAGGAAG AVAKSAVAPL ERIKILLQTR TNDFRSLGLT HSLKKVLQCD GPLGFYKGNG ASVIRIIPYA ALHYMTYEVY
101: RDWILENNLP LGSGPVVDLV AGSAAGGTAV LCTYPLDLAR TKLAYQVSDT GQSFRGGTIG FYRQPACSGI REVLTMAYKE GGPRGLYRGI GPTLIGILPY
201: AGLKFYIYEE LKRHVPEEHQ NSVRMHLPCG ALAGLFGQTL TYPLDVVRRQ MQVENLLPMT GDGSNKRYKN TFDGLNTIVR TQGWRQLFAG LSINYIKIVP
301: SVAIGFAVYE SMKSWLRIPP RERSKPA

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.