Factsheet for Bra037443.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86261	Canola	cytosol	71.99	65.58
CDX85385	Canola	cytosol	71.66	65.28
AT5G48970.1	Thale cress	cytosol	70.68	64.01
Bra036153.1-P	Field mustard	cytosol	69.71	63.88
PGSC0003DMT400087691	Potato	mitochondrion	31.27	57.48
KRH50868	Soybean	cytosol	61.89	57.4
VIT_05s0020g01380.t01	Wine grape	cytosol	61.56	57.27
KRH02242	Soybean	cytosol	60.91	57.19
KRH37122	Soybean	cytosol	60.26	56.4
Solyc01g067070.2.1	Tomato	cytosol	60.26	55.89
KRH12112	Soybean	cytosol	59.61	55.79
Solyc12g099630.1.1	Tomato	cytosol	42.02	54.89
Os01t0934200-01	Rice	cytosol	58.31	53.27
KXG34072	Sorghum	cytosol	57.98	51.9
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	54.72	50.0
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	54.4	49.7
Zm00001d042213_P004	Maize	cytosol, plastid	59.28	47.15
HORVU3Hr1G098170.1	Barley	mitochondrion	54.4	43.95
Zm00001d011918_P002	Maize	cytosol	56.03	43.0
TraesCS3B01G493000.1	Wheat	cytosol	54.72	41.48
GSMUA_Achr10P...	Banana	mitochondrion	17.59	40.3
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.78	22.32
Bra016697.1-P	Field mustard	cytosol	23.78	22.05
Bra007623.1-P	Field mustard	cytosol	24.1	21.83
Bra037383.1-P	Field mustard	cytosol	23.78	20.86
Bra000944.1-P	Field mustard	cytosol	23.78	20.68
Bra026457.1-P	Field mustard	cytosol	21.82	20.06
Bra031891.1-P	Field mustard	cytosol	17.59	20.0
Bra011344.1-P	Field mustard	cytosol	23.78	19.11
Bra035801.1-P	Field mustard	cytosol	20.85	18.39
Bra017151.1-P	Field mustard	plastid	20.52	18.26
Bra000026.1-P	Field mustard	plastid	20.2	18.24
Bra007181.1-P	Field mustard	plastid	20.85	17.98
Bra014855.1-P	Field mustard	cytosol	20.85	17.88
Bra007793.1-P	Field mustard	cytosol	23.13	17.84
Bra001780.1-P	Field mustard	cytosol	14.66	16.36
Bra005684.1-P	Field mustard	plastid	20.52	15.59
Bra003653.1-P	Field mustard	plastid	19.54	15.11
Bra024342.1-P	Field mustard	plastid	20.52	15.07
Bra033473.1-P	Field mustard	plastid	18.57	14.96
Bra028702.1-P	Field mustard	cytosol	18.57	12.18
Bra019615.1-P	Field mustard	cytosol	18.89	12.16
Bra035722.1-P	Field mustard	cytosol	19.22	11.82
Bra009271.1-P	Field mustard	cytosol	14.66	10.44

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra037443	EnsemblPlants:Bra037443.1	EnsemblPlants:Bra037443.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4F8N1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646	SUPFAM:SSF103506	UniParc:UPI000253F9EE

Description

AT5G48970 (E=4e-072) | mitochondrial substrate carrier family protein

Coordinates

chrA06:-:21440547..21444526

Molecular Weight (calculated)

34888.4 Da

IEP (calculated)

10.021

GRAVY (calculated)

-0.082

Length

307 amino acids

Sequence
(BLAST)

001: MSGVWVFKNG VIRLVENPGA DETNTVKAKR KVLVYTPSNE IITSYSHLQR HLYALGWERY YGDPNLLQFH KASTVHLISL PTDFSRFKTM HMYDIVVKNR
101: NMFQGFWRGN VPALLMVMPY TSIQFTVLHK LKSFASGSTK TEDHIHLSPY LSFVSGALAG CAATLGSYPF DLLRTILASQ GEPKVYPTMR SAFFDIIKSR
201: GIRGLYNGLT PTLVEIVPYA GLQFGTYDMF KRWMMIEGLQ RHPRYGARVE RRAYRNMLDG LKQILMSEGW HGLYKGIVPS TVKAAPAGAV TFVAYEFTSD
301: WLESISW

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.