Factsheet for Os01t0934200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34072	Sorghum	cytosol	94.94	93.0
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	90.48	90.48
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	89.88	89.88
Zm00001d042213_P004	Maize	cytosol, plastid	92.86	80.83
HORVU3Hr1G098170.1	Barley	mitochondrion	90.48	80.0
VIT_05s0020g01380.t01	Wine grape	cytosol	77.08	78.48
GSMUA_Achr8P22520_001	Banana	cytosol	75.89	77.04
Zm00001d011918_P002	Maize	cytosol	90.77	76.25
KRH37122	Soybean	cytosol	74.4	76.22
Solyc01g067070.2.1	Tomato	cytosol	75.0	76.13
KRH50868	Soybean	cytosol	74.7	75.83
Solyc12g099630.1.1	Tomato	cytosol	52.68	75.32
TraesCS3B01G493000.1	Wheat	cytosol	90.77	75.31
KRH02242	Soybean	cytosol	73.21	75.23
KRH12112	Soybean	cytosol	73.21	75.0
CDX86261	Canola	cytosol	72.32	72.11
CDX85385	Canola	cytosol	72.32	72.11
CDY19928	Canola	cytosol	71.73	71.94
AT5G48970.1	Thale cress	cytosol	72.32	71.68
Bra036153.1-P	Field mustard	cytosol	71.43	71.64
CDY56673	Canola	cytosol	72.02	71.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	32.14	70.59
PGSC0003DMT400087691	Potato	mitochondrion	34.23	68.86
AT3G21390.2	Thale cress	cytosol	67.86	63.87
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	53.27	58.31
Os05t0585900-01	Rice	cytosol, mitochondrion	30.95	29.3
Os01t0143100-01	Rice	mitochondrion	25.0	26.09
Os01t0708900-01	Rice	cytosol, extracellular, peroxisome	25.89	25.82
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	25.89	25.59
Os03t0267700-01	Rice	cytosol	25.6	24.86
Os05t0171300-01	Rice	mitochondrion, plastid	27.98	22.65
Os01t0265200-01	Rice	plastid	25.3	22.31
Os08t0520000-01	Rice	cytosol	24.7	21.56
Os06t0602700-01	Rice	plastid	27.08	21.51
Os09t0497000-01	Rice	plastid	25.0	21.48
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	22.62	21.29
Os02t0202400-01	Rice	plastid	26.79	21.18
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	22.92	18.29
Os06t0604500-01	Rice	nucleus	25.89	16.89
Os02t0201500-00	Rice	plastid	27.68	16.03

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:AK069988	ProteinID:BAD87168.1	ProteinID:BAD87245.1	ProteinID:BAF07223.1
ProteinID:BAS76067.1	ProteinID:EEE55955.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0015234	GO:GO:0016020	GO:GO:0016021	GO:GO:0030974	GO:GO:0031305	GO:GO:0055085
GO:GO:0071934	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
EnsemblPlantsGene:Os01g0934200	EnsemblPlants:Os01t0934200-01	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF646	UniProt:Q5JMQ9	SUPFAM:SSF103506	UniParc:UPI00004C28CE	:	:

Description

Mitochondrial carrier protein domain containing protein. (Os01t0934200-01)

Coordinates

chr1:+:40978458..40983489

Molecular Weight (calculated)

37036.6 Da

IEP (calculated)

9.563

GRAVY (calculated)

-0.087

Length

336 amino acids

Sequence
(BLAST)

001: MGSEEEPSQM RRALVDALAG AISGGISRTV TSPLDVIKIR FQVQLEPTTS WGVLRRDVYG PSKYTGLLQA SKDILREEGL PGFWRGNVPA LLMYMPYTAI
101: QFTVLHKLKT FASGSSKTED HLHLSPYLSY VSGAIAGCAA TVGSYPFDLL RTILASQGEP KVYPDMRSAF LDIMKTRGFR GLYAGLTPTL VEIIPYAGLQ
201: FGSYDTFKRS MMTWNRYRYS HLNSGSEDDS VSSFQLFLCG FAAGTFSKAA CHPLDVVKKR FQIEGLKRHP RYGARIESST YKGMYHALKE IVAKEGFGGL
301: YKGLFPSLVK SAPAGAVTFV AYEYISDWIG SKAGVE

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.