Factsheet for HORVU3Hr1G098170.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	87.11	98.51
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	86.58	97.92
Os01t0934200-01	Rice	cytosol	80.0	90.48
KXG34072	Sorghum	cytosol	79.47	88.05
TraesCS3B01G493000.1	Wheat	cytosol	90.79	85.19
Zm00001d042213_P004	Maize	cytosol, plastid	76.84	75.65
VIT_05s0020g01380.t01	Wine grape	cytosol	64.74	74.55
KRH37122	Soybean	cytosol	63.68	73.78
Solyc01g067070.2.1	Tomato	cytosol	64.21	73.72
Solyc12g099630.1.1	Tomato	cytosol	45.53	73.62
Zm00001d011918_P002	Maize	cytosol	77.37	73.5
KRH12112	Soybean	cytosol	63.42	73.48
GSMUA_Achr8P22520_001	Banana	cytosol	63.68	73.11
KRH50868	Soybean	cytosol	63.68	73.11
KRH02242	Soybean	cytosol	62.63	72.78
AT5G48970.1	Thale cress	cytosol	61.84	69.32
CDY19928	Canola	cytosol	61.05	69.25
Bra036153.1-P	Field mustard	cytosol	60.79	68.96
CDX85385	Canola	cytosol	61.05	68.84
CDX86261	Canola	cytosol	61.05	68.84
CDY56673	Canola	cytosol	61.05	68.44
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	27.11	67.32
PGSC0003DMT400087691	Potato	mitochondrion	29.47	67.07
AT3G21390.2	Thale cress	cytosol	58.95	62.75
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	43.95	54.4
HORVU1Hr1G092860.1	Barley	cytosol	27.11	29.1
HORVU6Hr1G042080.7	Barley	cytosol	23.95	27.08
HORVU4Hr1G060540.1	Barley	cytosol	23.42	26.02
HORVU5Hr1G074710.1	Barley	mitochondrion	21.05	25.32
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	21.58	24.19
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	25.26	23.24
HORVU3Hr1G066850.4	Barley	mitochondrion	20.79	22.9
HORVU7Hr1G111040.2	Barley	cytosol	24.74	22.27
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	21.58	22.04
HORVU5Hr1G074670.1	Barley	mitochondrion	21.84	21.45
HORVU3Hr1G037170.3	Barley	plastid	22.37	20.05
HORVU4Hr1G078650.2	Barley	peroxisome	20.0	18.18
HORVU7Hr1G090020.9	Barley	mitochondrion	23.68	17.21

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A287MGC6	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU3Hr1G098170	EnsemblPlants:HORVU3Hr1G098170.1	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646	SUPFAM:SSF103506	UniParc:UPI000B471AC4	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:657629526..657636163

Molecular Weight (calculated)

41387.8 Da

IEP (calculated)

9.954

GRAVY (calculated)

-0.074

Length

380 amino acids

Sequence
(BLAST)

001: LPHHRFISRA KRGDLAVSFP EAAQPRPAPS SLRASSRLAS PRAAAAMGAG AAEEPSQMRR ALVDTAAGAI SGGISRTVTS PLDVIKIRFQ VQLEPTATWG
101: VLRRDVYGPS KYTGLMQATK DILREEGLPG FWRGNVPALF MYMPYTAIQF TVLHKLKTFA SGSSRTEDHL HLSPYLSYVS GAIAGSAATV GSYPFDLLRT
201: ILASQGEPKV YPNMRSALVD IVQTRGVRGL YAGLTPTLVE IIPYAGLQFG SYDTFKRSMM SWNRYRYGIE EDDSASSFQL FLCGFAAGTF SKAACHPLDV
301: VKKRFQIEGL KRHPRYGAQI ESSTYKGMYH ALTEIVVKEG FGGLYKGLFP SVVKSAPAGA VTFVAYEYIS DWIGAKAGVE

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.