Factsheet for HORVU1Hr1G025480.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, peroxisome, nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
peroxisome 1
plastid 1
nucleus 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G115500.1	Wheat	golgi	95.16	95.16
TraesCS1D01G116900.1	Wheat	cytosol	94.92	94.46
TraesCS1B01G135400.1	Wheat	cytosol	93.22	93.45
Zm00001d037640_P001	Maize	plastid	83.05	84.48
Zm00001d009799_P001	Maize	plastid	83.05	84.48
EES17800	Sorghum	cytosol	83.05	81.86
Os05t0171300-01	Rice	mitochondrion, plastid	81.6	81.2
KRH15889	Soybean	endoplasmic reticulum	43.34	74.9
GSMUA_Achr7P10000_001	Banana	mitochondrion	39.95	70.82
GSMUA_Achr7P10070_001	Banana	cytosol	65.13	69.69
CDX68843	Canola	cytosol	22.03	69.47
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	63.92	65.67
HORVU7Hr1G111040.2	Barley	cytosol	65.38	63.98
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	61.5	63.82
CDX68841	Canola	cytosol	58.11	63.66
Solyc08g061090.2.1	Tomato	plastid	60.77	63.07
VIT_11s0016g05110.t01	Wine grape	cytosol	60.77	62.75
VIT_04s0008g05240.t01	Wine grape	cytosol	60.29	62.72
AT4G32400.1	Thale cress	cytosol	59.08	62.24
CDX75241	Canola	cytoskeleton, cytosol, nucleus	57.38	62.04
Bra011344.1-P	Field mustard	cytosol	57.14	61.78
Bra007793.1-P	Field mustard	cytosol	58.84	61.06
CDY11524	Canola	cytosol	58.84	61.06
CDX76755	Canola	cytosol	58.6	60.96
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	59.32	59.9
KRH52458	Soybean	extracellular	55.69	58.82
KRH61786	Soybean	cytosol, nucleus, plastid	55.69	58.82
KRH05133	Soybean	mitochondrion	58.35	57.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum	61.99	57.27
HORVU5Hr1G074710.1	Barley	mitochondrion	31.48	41.14
HORVU5Hr1G074670.1	Barley	mitochondrion	33.17	35.4
HORVU1Hr1G092860.1	Barley	cytosol	26.39	30.79
HORVU4Hr1G078650.2	Barley	peroxisome	27.6	27.27
HORVU4Hr1G060540.1	Barley	cytosol	22.52	27.19
HORVU6Hr1G042080.7	Barley	cytosol	22.03	27.08
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	21.79	26.55
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	23.0	25.54
HORVU3Hr1G098170.1	Barley	mitochondrion	23.24	25.26
HORVU3Hr1G066850.4	Barley	mitochondrion	18.89	22.61
HORVU7Hr1G090020.9	Barley	mitochondrion	27.36	21.61
HORVU3Hr1G037170.3	Barley	plastid	21.79	21.23

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:AK360615	EMBL:AK373963	UniProt:F2D9Q3	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU1Hr1G025480
EnsemblPlants:HORVU1Hr1G025480.1	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF358	SUPFAM:SSF103506
UniParc:UPI0002005975	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D9Q3]

Coordinates

chrchr1H:+:123839352..123842968

Molecular Weight (calculated)

43990.3 Da

IEP (calculated)

9.600

GRAVY (calculated)

-0.005

Length

413 amino acids

Sequence
(BLAST)

001: MSNKGGGVRS QCAEATAADW GCCFLSLSLP PPAPAPPCDA DTNGGFNLAW TLHQSFHPPA GLFASVGHKV GVGFPASSSG AASSENLQDP YRKYVSPEAV
101: ETSLPVPGDG AGLRGKGKKK AVRIKIKVGN SHLKRLISGG LAGAVSRTVV APLETIRTHL MVGSNGNSST EVFESIMKNE GWTGLFRGNF VNVIRVAPSK
201: AIELFAFDTA KKFLTPKSGE EQKIPIPPSL VAGAFAGFSS TLCTYPLELI KTRLTIQRGV YDNFLHAFVK IVREEGPTEL YRGLTPSLIG VVPYAATNYF
301: AYDTLKKVYK KMFKTNEIGN VPTLLIGSAA GAISSTATFP LEVARKHMQV GAVSGRKVYK NMLHALLTIL EDEGAGGLYR GLGPSCMKLV PAAGISFMCY
401: EACKKILIEE KDE

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.