Factsheet for Bra007793.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11524	Canola	cytosol	100.0	100.0
CDX76755	Canola	cytosol	98.74	98.99
Bra011344.1-P	Field mustard	cytosol	78.64	81.94
KRH15889	Soybean	endoplasmic reticulum	44.22	73.64
TraesCS7A01G495700.1	Wheat	cytosol, plastid	38.44	72.51
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	69.6	69.6
Solyc08g061090.2.1	Tomato	plastid	69.35	69.35
VIT_04s0008g05240.t01	Wine grape	cytosol	68.59	68.77
KRH52458	Soybean	extracellular	66.83	68.03
KRH61786	Soybean	cytosol, nucleus, plastid	66.58	67.77
GSMUA_Achr7P10070_001	Banana	cytosol	61.56	63.47
KRH05133	Soybean	mitochondrion	65.58	62.44
Zm00001d009799_P001	Maize	plastid	63.07	61.82
Os05t0171300-01	Rice	mitochondrion, plastid	63.07	60.48
Zm00001d037640_P001	Maize	plastid	61.31	60.1
GSMUA_Achr7P10000_001	Banana	mitochondrion	35.18	60.09
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	60.05	59.45
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	61.06	58.84
TraesCS1B01G135400.1	Wheat	cytosol	60.8	58.74
EES17800	Sorghum	cytosol	61.81	58.71
TraesCS1A01G115500.1	Wheat	golgi	60.8	58.6
Os06t0602700-01	Rice	plastid	62.06	58.39
TraesCS1D01G116900.1	Wheat	cytosol	60.55	58.07
Zm00001d046400_P002	Maize	mitochondrion	61.06	57.86
EER90006	Sorghum	plastid	61.06	57.72
HORVU7Hr1G111040.2	Barley	cytosol	60.05	56.64
TraesCS7B01G401600.1	Wheat	cytosol	60.3	56.6
TraesCS7D01G483000.1	Wheat	cytosol	59.8	56.26
GSMUA_Achr10P...	Banana	endoplasmic reticulum	58.79	52.35
TraesCS6B01G210000.1	Wheat	plastid	55.53	51.52
TraesCS6D01G168200.1	Wheat	golgi	55.28	51.28
Os02t0202400-01	Rice	plastid	54.27	50.82
TraesCS6A01G175100.1	Wheat	plastid	55.28	50.81
EES04720	Sorghum	plastid	53.02	48.51
Zm00001d015746_P001	Maize	plastid	52.51	47.83
Bra035801.1-P	Field mustard	cytosol	30.9	35.34
Bra007623.1-P	Field mustard	cytosol	27.64	32.45
Bra001780.1-P	Field mustard	cytosol	22.11	32.0
Bra037383.1-P	Field mustard	cytosol	28.14	32.0
Bra000944.1-P	Field mustard	cytosol	28.14	31.73
Bra031891.1-P	Field mustard	cytosol	20.85	30.74
Bra000026.1-P	Field mustard	plastid	25.88	30.29
Bra026457.1-P	Field mustard	cytosol	25.38	30.24
Bra017151.1-P	Field mustard	plastid	25.88	29.86
Bra016697.1-P	Field mustard	cytosol	24.37	29.31
Bra014855.1-P	Field mustard	cytosol	25.38	28.21
Bra007181.1-P	Field mustard	plastid	25.13	28.09
Bra036153.1-P	Field mustard	cytosol	23.62	28.06
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	22.86	27.83
Bra003653.1-P	Field mustard	plastid	26.38	26.45
Bra024342.1-P	Field mustard	plastid	27.64	26.32
Bra005684.1-P	Field mustard	plastid	25.38	25.0
Bra033473.1-P	Field mustard	plastid	22.61	23.62
Bra028702.1-P	Field mustard	cytosol	27.39	23.29
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	17.84	23.13
Bra019615.1-P	Field mustard	cytosol	26.38	22.01
Bra009271.1-P	Field mustard	cytosol	23.62	21.81
Bra035722.1-P	Field mustard	cytosol	25.63	20.44

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra007793	EnsemblPlants:Bra007793.1	EnsemblPlants:Bra007793.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4CU99	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF662	SUPFAM:SSF103506	UniParc:UPI0002542C98
SEG:seg	:	:	:	:	:

Description

AT4G32400 (E=5e-159) SHS1, ATBT1 | SHS1 (SODIUM HYPERSENSITIVE 1); binding / nucleotide transmembrane transporter/ transporter

Coordinates

chrA09:-:30898099..30899667

Molecular Weight (calculated)

42904.1 Da

IEP (calculated)

9.591

GRAVY (calculated)

-0.017

Length

398 amino acids

Sequence
(BLAST)

001: MGKTGINLFD DTSNGFFSVS DLGSDWSLQN PTYRPVGGLF ASVNQLGAGF GSGLGSGSIP DPPNRDNSSF TAQLNDLCTK YSPFKEVEVE EEEVIGQKKK
101: KKGGFKLKLK ISNPALRRLF SGAVAGAVSR TAVAPLETIR THLMVGSGGE STTEVFRDIM KHEGWKGLFR GNLVNVIRVA PARAVELFVF ETVNKKLTPK
201: LGEDSKIPIP ASLLAGACAG VSQTLLTYPL ELVKTRLTIQ RGVYKGILDA FVKIIREEGP TELYRGLAPS LIGVVPYAAT NYFAYDSLRK AYRKMVKKES
301: IGNVETLLIG SLAGALSSTA TFPLEVARKH MQVGAVGGRA VYKNMLHALV CILEQEGLAG WYRGLGPSCL KLVPAAGISF MCYEACKKIL VENNNEDA

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.