Factsheet for Bra005684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11199	Canola	plastid	98.76	98.52
CDX80771	Canola	cytosol, plastid	98.51	98.51
AT5G01500.1	Thale cress	cytosol	93.07	90.6
CDX70930	Canola	cytosol	38.86	80.93
Bra033473.1-P	Field mustard	plastid	65.1	69.03
Bra037383.1-P	Field mustard	cytosol	26.24	30.29
Bra007623.1-P	Field mustard	cytosol	25.25	30.09
Bra026457.1-P	Field mustard	cytosol	24.75	29.94
Bra000944.1-P	Field mustard	cytosol	25.99	29.75
Bra016697.1-P	Field mustard	cytosol	24.26	29.61
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.76	29.36
Bra031891.1-P	Field mustard	cytosol	19.31	28.89
Bra000026.1-P	Field mustard	plastid	23.27	27.65
Bra017151.1-P	Field mustard	plastid	23.27	27.25
Bra001780.1-P	Field mustard	cytosol	18.32	26.91
Bra014855.1-P	Field mustard	cytosol	23.76	26.82
Bra036153.1-P	Field mustard	cytosol	21.53	25.97
Bra007181.1-P	Field mustard	plastid	22.77	25.84
Bra011344.1-P	Field mustard	cytosol	24.26	25.65
Bra007793.1-P	Field mustard	cytosol	25.0	25.38
Bra035801.1-P	Field mustard	cytosol	21.78	25.29
Bra003653.1-P	Field mustard	plastid	23.51	23.93
Bra024342.1-P	Field mustard	plastid	24.5	23.68
Bra028702.1-P	Field mustard	cytosol	24.75	21.37
Bra019615.1-P	Field mustard	cytosol	24.5	20.75
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	15.59	20.52
Bra009271.1-P	Field mustard	cytosol	21.29	19.95
Bra035722.1-P	Field mustard	cytosol	23.76	19.24

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra005684	EnsemblPlants:Bra005684.1	EnsemblPlants:Bra005684.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009526	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987
GO:GO:0010117	GO:GO:0010206	GO:GO:0015867	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021
GO:GO:0019538	GO:GO:0042651	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M4CN96
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF619	SUPFAM:SSF103506	UniParc:UPI000253FA24	SEG:seg	:

Description

AT5G01500 (E=1e-187) | mitochondrial substrate carrier family protein

Coordinates

chrA03:-:118674..121027

Molecular Weight (calculated)

43792.3 Da

IEP (calculated)

10.150

GRAVY (calculated)

-0.009

Length

404 amino acids

Sequence
(BLAST)

001: MGEEKSLLQF RSIPSLKTSD FALTTEPSWR LPSRGNTRSG GVLSNFASLS VAIRRDRRES GGAFASVSVV IPTKEEDDVF APTSAQLLKN PVALLSFVPK
101: DAALFFAGAF AGAAAKSVTA PLDRIKLLMQ THGVRAGQQS AKKAIGFIEA IMLIGREEGV KGYWKGNLPQ VIRIVPYSAV QLFAYETYKK LFRGEDGQLS
201: VLGRLGAGAC AGMTSTLITY PLDVLRLRLA VEPGYRTMSQ VALNMLREEG VASFYNGLGP SLLSIAPYIA LNFCVFDLVK KSLPEKYQKK TQASLLTAVV
301: AAAIATGTCY PLDTIRRQMQ LKGTPYKSVL DAFSGIIERE GVIGLYRGFV PNALKSMPNS SIKLTTFDIV KKLIAASEKE YQKIADDNRK KAAATPPNTT
401: DEQT

Best Arabidopsis Sequence Match ( AT5G01500.1 )
(BLAST)

001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT

Arabidopsis Description

TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.