Factsheet for Bra036153.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19928	Canola	cytosol	99.4	99.4
AT5G48970.1	Thale cress	cytosol	93.13	92.04
PGSC0003DMT400087691	Potato	mitochondrion	39.1	78.44
KRH02242	Soybean	cytosol	76.42	78.29
KRH12112	Soybean	cytosol	76.42	78.05
KRH37122	Soybean	cytosol	76.42	78.05
KRH50868	Soybean	cytosol	76.72	77.64
VIT_05s0020g01380.t01	Wine grape	cytosol	76.12	77.27
Solyc01g067070.2.1	Tomato	cytosol	75.82	76.74
Solyc12g099630.1.1	Tomato	cytosol	51.64	73.62
Os01t0934200-01	Rice	cytosol	71.64	71.43
KXG34072	Sorghum	cytosol	71.64	69.97
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	63.88	69.71
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	69.25	69.05
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	69.25	69.05
Zm00001d042213_P004	Maize	cytosol, plastid	72.54	62.95
GSMUA_Achr10P...	Banana	mitochondrion	24.78	61.94
HORVU3Hr1G098170.1	Barley	mitochondrion	68.96	60.79
Zm00001d011918_P002	Maize	cytosol	69.25	58.0
TraesCS3B01G493000.1	Wheat	cytosol	69.25	57.28
Bra007623.1-P	Field mustard	cytosol	30.15	29.79
Bra037383.1-P	Field mustard	cytosol	29.55	28.29
Bra000944.1-P	Field mustard	cytosol	29.55	28.05
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	26.57	27.22
Bra016697.1-P	Field mustard	cytosol	26.87	27.19
Bra000026.1-P	Field mustard	plastid	27.46	27.06
Bra017151.1-P	Field mustard	plastid	27.46	26.67
Bra026457.1-P	Field mustard	cytosol	26.27	26.35
Bra007181.1-P	Field mustard	plastid	27.16	25.56
Bra014855.1-P	Field mustard	cytosol	27.16	25.42
Bra011344.1-P	Field mustard	cytosol	28.06	24.61
Bra031891.1-P	Field mustard	cytosol	19.7	24.44
Bra007793.1-P	Field mustard	cytosol	28.06	23.62
Bra035801.1-P	Field mustard	cytosol	23.28	22.41
Bra005684.1-P	Field mustard	plastid	25.97	21.53
Bra033473.1-P	Field mustard	plastid	24.18	21.26
Bra001780.1-P	Field mustard	cytosol	16.42	20.0
Bra003653.1-P	Field mustard	plastid	22.99	19.4
Bra024342.1-P	Field mustard	plastid	22.99	18.42
Bra028702.1-P	Field mustard	cytosol	24.18	17.31
Bra019615.1-P	Field mustard	cytosol	24.48	17.19
Bra035722.1-P	Field mustard	cytosol	25.37	17.03
Bra009271.1-P	Field mustard	cytosol	19.7	15.31

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra036153	EnsemblPlants:Bra036153.1	EnsemblPlants:Bra036153.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4F4Z9	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646	SUPFAM:SSF103506	UniParc:UPI0002541EC7

Description

AT5G48970 (E=2e-184) | mitochondrial substrate carrier family protein

Coordinates

chrA09:-:2433904..2435463

Molecular Weight (calculated)

37156.0 Da

IEP (calculated)

9.818

GRAVY (calculated)

-0.030

Length

335 amino acids

Sequence
(BLAST)

001: MKAVDDDPGQ IKRALIDASA GAISGAVSRT VTSPLDVIKI RFQVQLEPTT SWSMVRGNLS GASKYTGMFQ ATKDIFREEG FRGFWRGNVP ALLMVMPYTS
101: IQFTVLHKLK SFASGSTKAE DHIHLSPYLS FISGALAGCA ATLGSYPFDL LRTILASQGE PKVYPTMRSA FVDIIKSRGV RGLYNGLTPT LVEIVPYAGL
201: QFGTYDMFKR WMMDWNRYML SSKDQINVDT NLSSFQLFVC GLGAGTSAKL VCHPLDVVKK RFQIEGLQRH PRYGARLEQR AYRNMLDGLK QILMSEGWHG
301: LYKGIVPSTV KAAPAGAVTF VAYEFTSDWL ESVSW

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.