CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046400_P002	Maize	mitochondrion	95.25	95.48
TraesCS7A01G495700.1	Wheat	cytosol, plastid	45.13	90.05
Os06t0602700-01	Rice	plastid	89.79	89.36
TraesCS7B01G401600.1	Wheat	cytosol	83.85	83.25
TraesCS7D01G483000.1	Wheat	cytosol	83.61	83.22
HORVU7Hr1G111040.2	Barley	cytosol	83.14	82.94
KRH15889	Soybean	endoplasmic reticulum	41.57	73.22
GSMUA_Achr7P10070_001	Banana	cytosol	63.18	68.91
GSMUA_Achr7P10000_001	Banana	mitochondrion	37.05	66.95
CDX68843	Canola	cytosol	20.67	66.41
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	62.95	65.92
VIT_04s0008g05240.t01	Wine grape	cytosol	61.76	65.49
EES17800	Sorghum	cytosol	65.08	65.39
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	59.86	63.32
Solyc08g061090.2.1	Tomato	plastid	59.38	62.81
VIT_11s0016g05110.t01	Wine grape	cytosol	58.43	61.5
CDX68841	Canola	cytosol	54.87	61.27
Bra007793.1-P	Field mustard	cytosol	57.72	61.06
CDY11524	Canola	cytosol	57.72	61.06
CDX76755	Canola	cytosol	57.48	60.96
KRH52458	Soybean	extracellular	56.53	60.87
KRH61786	Soybean	cytosol, nucleus, plastid	56.29	60.61
Bra011344.1-P	Field mustard	cytosol	54.39	59.95
CDX75241	Canola	cytoskeleton, cytosol, nucleus	54.39	59.95
AT4G32400.1	Thale cress	cytosol	55.11	59.18
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	57.48	59.17
EES04720	Sorghum	plastid	58.67	56.78
KRH05133	Soybean	mitochondrion	56.06	56.46
GSMUA_Achr10P...	Banana	endoplasmic reticulum	59.38	55.93
EER97679	Sorghum	cytosol	30.64	35.15
EER96987	Sorghum	cytosol	31.12	34.93
EES15354	Sorghum	cytosol	28.98	31.94
EES20024	Sorghum	cytosol	24.23	28.73
KXG29836	Sorghum	cytosol, mitochondrion, plastid	22.57	28.27
EES00336	Sorghum	cytosol	21.62	27.58
OQU92863	Sorghum	cytosol	22.57	27.46
KXG34072	Sorghum	cytosol	22.09	27.11
EES00940	Sorghum	plastid	20.9	25.88
KXG39987	Sorghum	peroxisome	26.37	25.87
EES01355	Sorghum	extracellular	20.19	25.3
EES02734	Sorghum	mitochondrion	20.43	21.5
EER88619	Sorghum	cytosol, plastid	25.89	21.04
KXG29744	Sorghum	plastid	25.65	20.45
OQU92679	Sorghum	cytosol	5.94	20.16

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8082257	UniProt:C5Z5L9	EnsemblPlants:EER90006	ProteinID:EER90006
ProteinID:EER90006.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF358	EnsemblPlantsGene:SORBI_3010G184100	SUPFAM:SSF103506	unigene:Sbi.15254	UniParc:UPI0001A89972
RefSeq:XP_002438639.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:52392383..52396386

Molecular Weight (calculated)

45597.6 Da

IEP (calculated)

9.515

GRAVY (calculated)

-0.013

Length

421 amino acids

Sequence
(BLAST)

001: MAATMVAMTA RSKNSALSVE KKQVWSIQLP ELRFPWDSHE DKGFSLSLQG SGPAHGGLFA SVGLKVSTGA PAVAPGPGDK DIKIPFADHC MKYVSEAVGY
101: KVITTKAEPV EEEVVDAKAK KAAKKRGLKL KIKIGNPHLR RLVSGAFAGA VSRTCVAPLE TIRTHLMVGS NGDSMTEVFQ SIMNTEGWTG LFRGNLVNVI
201: RVAPSKAIEL FAFDTAKKFL TPKADESPKT FLPPSLVAGA LAGVSSTLCM YPLELIKTRL TIEKDVYNNF LHAFVKILRE EGPSELYRGL TPSLIGVVPY
301: AATNYYAYDT LKKLYRKTFK QEEIGNIPTL LIGSAAGAIS STATFPLEVA RKQMQVGAVG GRQIYKNVFH ALYCIMEKEG VSGLYKGLGP SCIKLMPAAG
401: ISFMCYEACK KILVEDNEDS E

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.