Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011697_P001 | Maize | peroxisome | 92.56 | 93.67 |
| Os01t0708900-01 | Rice | cytosol, extracellular, peroxisome | 89.29 | 89.02 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 88.1 | 87.83 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 87.5 | 87.24 |
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 87.2 | 86.94 |
| HORVU3Hr1G066850.4 | Barley | mitochondrion | 75.6 | 73.62 |
| EES00940 | Sorghum | plastid | 74.11 | 73.24 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 71.73 | 71.3 |
| CDX84024 | Canola | cytosol | 63.69 | 65.05 |
| CDX96850 | Canola | cytosol | 63.99 | 64.95 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 66.07 | 64.53 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 62.8 | 64.53 |
| Bra016697.1-P | Field mustard | cytosol | 63.39 | 64.35 |
| AT1G14560.1 | Thale cress | cytosol | 63.39 | 64.35 |
| PGSC0003DMT400021172 | Potato | plastid | 64.29 | 64.29 |
| Bra026206.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 62.2 | 63.91 |
| Solyc08g062860.2.1 | Tomato | cytosol | 64.58 | 63.27 |
| KRH52207 | Soybean | cytosol | 61.01 | 60.65 |
| KRH61524 | Soybean | cytosol | 61.01 | 60.47 |
| CDY67915 | Canola | cytosol | 40.77 | 54.37 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 52.08 | 52.08 |
| EES20024 | Sorghum | cytosol | 34.23 | 32.39 |
| OQU92863 | Sorghum | cytosol | 30.06 | 29.19 |
| EES00336 | Sorghum | cytosol | 28.57 | 29.09 |
| OQU92679 | Sorghum | cytosol | 9.82 | 26.61 |
| KXG34072 | Sorghum | cytosol | 25.6 | 25.07 |
| EES02734 | Sorghum | mitochondrion | 29.46 | 24.75 |
| EER96987 | Sorghum | cytosol | 25.0 | 22.4 |
| EER97679 | Sorghum | cytosol | 24.11 | 22.07 |
| EES04720 | Sorghum | plastid | 27.38 | 21.15 |
| EES17800 | Sorghum | cytosol | 26.19 | 21.0 |
| KXG39987 | Sorghum | peroxisome | 26.19 | 20.51 |
| EES15354 | Sorghum | cytosol | 23.21 | 20.42 |
| EER90006 | Sorghum | plastid | 25.3 | 20.19 |
| KXG29744 | Sorghum | plastid | 29.76 | 18.94 |
| EER88619 | Sorghum | cytosol, plastid | 28.87 | 18.73 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:8069772 | UniProt:C5XHP1 | ncoils:Coil | EnsemblPlants:EES01355 |
| ProteinID:EES01355 | ProteinID:EES01355.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 |
| GO:GO:0008150 | GO:GO:0015217 | GO:GO:0015228 | GO:GO:0015866 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0035349 | GO:GO:0055085 | GO:GO:0080121 | GO:GO:0080122 | InterPro:Graves_DC | InterPro:IPR018108 |
| InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 |
| PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF463 | EnsemblPlantsGene:SORBI_3003G273900 | SUPFAM:SSF103506 |
| unigene:Sbi.15740 | UniParc:UPI0001A847C6 | RefSeq:XP_002456235.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:61008735..61013024
Molecular Weight (calculated)
36129.2 Da
IEP (calculated)
10.106
GRAVY (calculated)
0.069
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPSQGSVA VAAAQVDLCA LDLVPIFAKE MIAGGVAGAF SKTAIAPLER VKILLQTRTN EFGSLGVLKS LKKLRQLDGV MGFYKGNGAS VLRIVPYAAL
101: HYMAYERYRC WILNNCPSLG TGPLVDLLAG SASGGTAVLC TYPLDLARTK LAFQVNNSEQ LGRALKRGSP QPAYGGIIDV FRGVYSEGGA RALYRGVGPT
201: LMGILPYAGL KFYIYEGLKA HVPEDYRSSV TLKLSCGAAA GLFGQTLTYP LDVVRRQMQV QSQQHHEQFG GPRITGTFQG LLSIKQTQGW KQLFAGLSLN
301: YIKVVPSVAI GFTAYDTMKH LLKIPPREKR SGHGPA
101: HYMAYERYRC WILNNCPSLG TGPLVDLLAG SASGGTAVLC TYPLDLARTK LAFQVNNSEQ LGRALKRGSP QPAYGGIIDV FRGVYSEGGA RALYRGVGPT
201: LMGILPYAGL KFYIYEGLKA HVPEDYRSSV TLKLSCGAAA GLFGQTLTYP LDVVRRQMQV QSQQHHEQFG GPRITGTFQG LLSIKQTQGW KQLFAGLSLN
301: YIKVVPSVAI GFTAYDTMKH LLKIPPREKR SGHGPA
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.