Factsheet for GSMUA_Achr8P26260_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0571000-02	Rice	cytosol, peroxisome, plastid	77.51	77.06
Zm00001d011226_P002	Maize	plastid	77.51	77.06
EES00940	Sorghum	plastid	77.22	76.76
HORVU3Hr1G049720.4	Barley	cytosol, peroxisome, plastid	76.04	75.81
TraesCS3D01G209300.1	Wheat	plastid	76.04	75.81
TraesCS3A01G206300.1	Wheat	plastid	75.44	75.22
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	52.07	74.26
Zm00001d011697_P001	Maize	peroxisome	72.19	73.49
Os01t0708900-01	Rice	cytosol, extracellular, peroxisome	72.78	73.0
VIT_04s0008g01060.t01	Wine grape	cytosol	73.08	71.8
EES01355	Sorghum	extracellular	71.3	71.73
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	70.12	70.33
TraesCS3B01G280800.1	Wheat	cytosol, mitochondrion, plastid	69.53	69.73
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	69.53	69.73
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.5	66.67
PGSC0003DMT400021172	Potato	plastid	66.27	66.67
CDX84024	Canola	cytosol	64.79	66.57
CDX96850	Canola	cytosol	65.09	66.47
AT1G14560.1	Thale cress	cytosol	65.09	66.47
Solyc08g062860.2.1	Tomato	cytosol	67.16	66.18
Bra016697.1-P	Field mustard	cytosol	64.79	66.16
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	63.91	66.06
KRH52207	Soybean	cytosol	64.79	64.79
KRH61524	Soybean	cytosol	64.5	64.31
HORVU3Hr1G066850.4	Barley	mitochondrion	60.65	59.42
CDY67915	Canola	cytosol	42.31	56.75
GSMUA_Achr10P...	Banana	cytosol	54.44	53.03
GSMUA_Achr7P09310_001	Banana	cytosol	51.18	50.0
GSMUA_Achr3P32000_001	Banana	cytosol	36.98	35.01
GSMUA_Achr7P24620_001	Banana	cytosol	36.69	34.73
GSMUA_Achr2P06340_001	Banana	cytosol	36.39	34.36
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	15.09	33.33
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	28.4	32.21
GSMUA_Achr11P...	Banana	extracellular	9.47	31.68
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	27.81	31.65
GSMUA_Achr10P...	Banana	cytosol	29.88	29.97
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	25.15	29.93
GSMUA_Achr8P02430_001	Banana	cytosol	30.77	29.63
GSMUA_Achr8P22520_001	Banana	cytosol	26.63	27.19
GSMUA_Achr2P14780_001	Banana	mitochondrion	27.81	27.17
GSMUA_Achr9P03630_001	Banana	mitochondrion	28.4	25.46
GSMUA_Achr6P33950_001	Banana	plastid	29.59	25.0
GSMUA_Achr6P03740_001	Banana	cytosol	25.15	23.48
GSMUA_Achr7P10070_001	Banana	cytosol	26.33	23.06
GSMUA_Achr11P...	Banana	cytosol	8.58	23.02
GSMUA_Achr6P30940_001	Banana	cytosol	24.26	22.84
GSMUA_Achr7P10000_001	Banana	mitochondrion	15.68	22.75
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	26.92	22.64
GSMUA_Achr10P...	Banana	cytosol	26.04	22.62
GSMUA_Achr10P...	Banana	mitochondrion	8.88	22.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	9.47	20.91
GSMUA_Achr10P...	Banana	endoplasmic reticulum	26.04	19.69
GSMUA_AchrUn_...	Banana	cytosol	29.29	19.26
GSMUA_Achr8P26070_001	Banana	cytosol	29.29	19.22
GSMUA_Achr5P05990_001	Banana	cytosol	28.11	18.48

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0015228	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1990559	EnsemblPlantsGene:GSMUA_Achr8G26260_001
EnsemblPlants:GSMUA_Achr8P26260_001	EnsemblPlants:GSMUA_Achr8T26260_001	InterPro:Graves_DC	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0TTS9
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00928
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF617	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI000295773C
SEG:seg	:	:	:	:	:

Description

Putative Mitochondrial substrate carrier family protein B [Source:GMGC_GENE;Acc:GSMUA_Achr8G26260_001]

Coordinates

chr8:-:29888197..29893851

Molecular Weight (calculated)

36701.9 Da

IEP (calculated)

10.156

GRAVY (calculated)

0.162

Length

338 amino acids

Sequence
(BLAST)

001: MDSSQGSTMT SAAAAAKVDV SVVDLLPVYV KELIAGGAAG AFSKTAVAPL ERIKIILQTR TEGFKSLGIL QSLRKLWQHE GFFGFYKGNG ASVLRIVPYA
101: ALHFMTYEQY RCWILNNHSS FISGPFVDLL AGSAAGGTAV LCTYPLDLAR TKLAYQVNSP GRLSSGLRMF SPQPAYTGIG DVFKKVYMEG GIRSLYRGVG
201: PTLIGILPYA GLKFYIYEDL KARVPEEYQK SVVLRLSCGA LAGLFGQTLT YPLDVVRRQM QVQNQQSLNH PGAPLIRGTV QGLSFILHTQ GWRQLFAGLS
301: LNYVKVVPSV AIGFTAYDMM KTLLRVPPRA KSSAPSAA

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.