Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P22520_001 | Banana | cytosol | 73.2 | 33.84 |
| Os01t0934200-01 | Rice | cytosol | 70.59 | 32.14 |
| KXG34072 | Sorghum | cytosol | 70.59 | 31.49 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 67.32 | 30.65 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 66.67 | 30.36 |
| Zm00001d042213_P004 | Maize | cytosol, plastid | 71.9 | 28.5 |
| HORVU3Hr1G098170.1 | Barley | mitochondrion | 67.32 | 27.11 |
| Zm00001d011918_P002 | Maize | cytosol | 69.93 | 26.75 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 67.97 | 25.68 |
| GSMUA_Achr8P25060_001 | Banana | cytosol, mitochondrion, plastid | 21.57 | 21.57 |
| GSMUA_Achr11P... | Banana | cytosol | 9.8 | 11.9 |
| GSMUA_Achr3P32000_001 | Banana | cytosol | 25.49 | 10.92 |
| GSMUA_Achr7P24620_001 | Banana | cytosol | 24.84 | 10.64 |
| GSMUA_Achr10P... | Banana | mitochondrion | 9.15 | 10.45 |
| GSMUA_Achr2P06340_001 | Banana | cytosol | 24.18 | 10.34 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 22.88 | 10.12 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 22.22 | 9.69 |
| GSMUA_Achr10P... | Banana | cytosol | 21.57 | 9.51 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 20.91 | 9.47 |
| GSMUA_Achr6P03370_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 18.3 | 9.43 |
| GSMUA_Achr10P... | Banana | cytosol | 20.26 | 9.2 |
| GSMUA_Achr4P24190_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 17.65 | 9.06 |
| GSMUA_Achr9P03630_001 | Banana | mitochondrion | 21.57 | 8.75 |
| GSMUA_Achr10P... | Banana | cytosol | 22.22 | 8.74 |
| GSMUA_Achr5P05990_001 | Banana | cytosol | 28.1 | 8.37 |
| GSMUA_Achr6P03740_001 | Banana | cytosol | 19.61 | 8.29 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 21.57 | 8.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.45 | 8.17 |
| GSMUA_Achr2P14780_001 | Banana | mitochondrion | 17.65 | 7.8 |
| GSMUA_Achr8P26070_001 | Banana | cytosol | 26.14 | 7.77 |
| GSMUA_Achr6P30940_001 | Banana | cytosol | 17.65 | 7.52 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 17.65 | 6.99 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 18.3 | 6.97 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 17.65 | 6.04 |
| GSMUA_Achr8P25070_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 9.8 | 5.28 |
| GSMUA_Achr11P... | Banana | extracellular | 3.27 | 4.95 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 3.92 | 2.58 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr10G02230_001 | EnsemblPlants:GSMUA_Achr10P02230_001 | EnsemblPlants:GSMUA_Achr10T02230_001 | InterPro:IPR018108 |
| InterPro:IPR023395 | UniProt:M0REQ0 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 |
| PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF628 | SUPFAM:SSF103506 | UniParc:UPI000296D943 |
| SEG:seg | : | : | : | : | : |
Description
Putative Mitochondrial thiamine pyrophosphate carrier 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G02230_001]
Coordinates
chr10:-:6343319..6358493
Molecular Weight (calculated)
17335.2 Da
IEP (calculated)
9.899
GRAVY (calculated)
0.167
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPGQLKRA LVDSLAGAVS GGISRTVTSP LDVIKIRFQV QIEPTSSWAL LKRDLYGTSK YTGILQATRD IFREEGLSGF WRGNVPALLL YMPYTAIQFT
101: VLHKLKTFAA GSSKTGMQFW ERLLIFLLLR FRDITCLYSN SFSLSHAWMC YLV
101: VLHKLKTFAA GSSKTGMQFW ERLLIFLLLR FRDITCLYSN SFSLSHAWMC YLV
001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
Arabidopsis Description
Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.