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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75241 Canola cytoskeleton, cytosol, nucleus 96.29 95.03
Bra011344.1-P Field mustard cytosol 96.02 94.76
CDX68843 Canola cytosol 30.24 87.02
AT4G32400.1 Thale cress cytosol 89.66 86.22
CDY11524 Canola cytosol 81.96 77.64
CDX76755 Canola cytosol 81.43 77.33
KRH15889 Soybean endoplasmic reticulum 47.21 74.48
TraesCS7A01G495700.1 Wheat cytosol, plastid 38.99 69.67
Solyc08g061090.2.1 Tomato plastid 71.35 67.59
VIT_04s0008g05240.t01 Wine grape cytosol 71.09 67.51
PGSC0003DMT400053564 Potato cytosol, nucleus, plastid 70.82 67.09
KRH52458 Soybean extracellular 68.44 65.98
KRH61786 Soybean cytosol, nucleus, plastid 67.64 65.22
KRH05133 Soybean mitochondrion 68.44 61.72
GSMUA_Achr7P10070_001 Banana cytosol 62.07 60.62
Zm00001d009799_P001 Maize plastid 64.19 59.61
Zm00001d037640_P001 Maize plastid 63.13 58.62
HORVU1Hr1G025480.1 Barley nucleus, peroxisome, vacuole 63.66 58.11
Os05t0171300-01 Rice mitochondrion, plastid 63.66 57.83
TraesCS1A01G115500.1 Wheat golgi 63.13 57.63
TraesCS1B01G135400.1 Wheat cytosol 62.33 57.04
TraesCS1D01G116900.1 Wheat cytosol 62.6 56.87
EES17800 Sorghum cytosol 63.13 56.8
GSMUA_Achr6P05150_001 Banana cytosol, plastid, vacuole 59.95 56.22
Os06t0602700-01 Rice plastid 62.86 56.03
Zm00001d046400_P002 Maize mitochondrion 61.54 55.24
EER90006 Sorghum plastid 61.27 54.87
TraesCS7D01G483000.1 Wheat cytosol 61.54 54.85
TraesCS7B01G401600.1 Wheat cytosol 61.54 54.72
GSMUA_Achr7P10000_001 Banana mitochondrion 33.69 54.51
HORVU7Hr1G111040.2 Barley cytosol 61.01 54.5
Os02t0202400-01 Rice plastid 56.76 50.35
GSMUA_Achr10P... Banana endoplasmic reticulum 59.68 50.34
TraesCS6B01G210000.1 Wheat plastid 56.5 49.65
TraesCS6D01G168200.1 Wheat golgi 55.97 49.18
TraesCS6A01G175100.1 Wheat plastid 56.23 48.96
EES04720 Sorghum plastid 54.11 46.9
Zm00001d015746_P001 Maize plastid 53.58 46.22
CDY29805 Canola cytosol 31.57 34.2
CDY25400 Canola cytosol, plastid 31.57 34.2
CDY01954 Canola mitochondrion 17.77 34.01
CDX82257 Canola cytosol 31.3 33.91
CDY36050 Canola cytosol, plastid 30.77 33.33
CDY07175 Canola cytosol 30.77 33.14
CDY48505 Canola cytosol 30.77 33.14
CDX71722 Canola cytosol 29.44 32.84
CDY11371 Canola cytosol 29.44 32.74
CDX91877 Canola cytosol 30.24 32.29
CDX74363 Canola cytosol 30.24 32.29
CDY66909 Canola cytosol, mitochondrion, plastid 10.08 31.15
CDY59491 Canola cytosol 27.59 30.59
CDX70930 Canola cytosol 15.65 30.41
CDY68466 Canola cytosol 26.79 30.33
CDY07764 Canola plastid 27.32 30.29
CDX94361 Canola cytosol 26.53 29.94
CDX84024 Canola cytosol 25.73 29.48
CDX96850 Canola cytosol 25.73 29.31
CDY18420 Canola plastid 26.79 29.28
CDX93344 Canola plastid 26.53 28.99
CDY13155 Canola cytosol 26.79 28.86
CDY40244 Canola plastid 25.46 28.66
CDY56673 Canola cytosol 25.73 28.61
CDY45268 Canola endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 24.67 28.44
CDX76183 Canola cytosol 26.26 28.29
CDY19928 Canola cytosol 24.93 28.06
CDY31292 Canola cytosol 25.2 27.14
CDX79251 Canola plastid 28.38 26.88
CDX85385 Canola cytosol 23.87 26.71
CDX86261 Canola cytosol 23.87 26.71
CDX68026 Canola plastid 28.12 26.7
CDY14527 Canola plastid 28.91 26.14
CDY41199 Canola plastid 24.93 26.11
CDY08834 Canola plastid 28.91 26.08
CDX97455 Canola plastid 10.34 25.83
CDY67915 Canola cytosol 16.71 25.0
CDX80771 Canola cytosol, plastid 26.53 24.75
CDY11199 Canola plastid 26.53 24.69
CDY23168 Canola plastid 24.14 23.88
CDX95305 Canola plastid 24.14 23.88
CDY33993 Canola plastid 22.55 23.81
CDY55175 Canola cytosol 27.06 21.79
CDY14050 Canola cytosol 26.53 21.37
CDX70028 Canola cytosol 22.02 20.91
CDY00231 Canola cytosol 26.26 20.75
CDX86953 Canola cytosol 26.26 20.75
CDY05832 Canola cytosol 26.26 19.8
CDX71683 Canola cytosol 26.26 19.8
CDX98981 Canola endoplasmic reticulum, golgi 21.22 18.78
CDY39471 Canola cytosol 17.77 16.71
Protein Annotations
EnsemblPlants:CDX68841EnsemblPlantsGene:GSBRNA2T00130565001Gene3D:1.50.40.10GO:A0A078BVJ1GO:GO:0006810GO:GO:0008150
GO:GO:0055085InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089PANTHER:PTHR24089:SF662PFAM:PF00153PFscan:PS50920PRINTS:PR00926ProteinID:CDX68841
ProteinID:CDX68841.1SEG:segSUPFAM:SSF103506UniParc:UPI0004EEA215MapMan:24.2.13:
Description
BnaC01g06120D
Coordinates
chrLK031789:+:1529478..1531351
Molecular Weight (calculated)
40529.2 Da
IEP (calculated)
9.656
GRAVY (calculated)
0.018
Length
377 amino acids
Sequence
(BLAST)
001: MGKTGIQLFD DSRNGLFSVS DLGCDWSLTG VNHHHSIGAL FASVNQTNPF GSGSVSSPGK WKSGKVEEWE ELVNGEKKKN GGGGMKLKIK IGNPSLRRLI
101: SGAVAGAVSR TVVAPLETIR THLMVGSGGN SSTEVFGDIM KHEGWTGLFR GNLVNVIRVA PARAVELFVF ETVNKKLSPE HGEQSKIPIP ASLLAGACAG
201: VSQTLLTYPL ELVKTRLTIQ RGVYKGIFDA FVKIIREEGP TELYRGLAPS LIGVVPYAAT NYFAYDSLRK AYRSFSKQEK IGNIETLLIG SLAGALSSTA
301: TFPLEVARKH MQVGAVSGRV VYKNMLDALV SILEHEGILG WYKGLGPSCL KLVPAAGISF MCYEACKKIL VENNQEA
Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.