Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 96.29 | 95.03 |
Bra011344.1-P | Field mustard | cytosol | 96.02 | 94.76 |
CDX68843 | Canola | cytosol | 30.24 | 87.02 |
AT4G32400.1 | Thale cress | cytosol | 89.66 | 86.22 |
CDY11524 | Canola | cytosol | 81.96 | 77.64 |
CDX76755 | Canola | cytosol | 81.43 | 77.33 |
KRH15889 | Soybean | endoplasmic reticulum | 47.21 | 74.48 |
TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 38.99 | 69.67 |
Solyc08g061090.2.1 | Tomato | plastid | 71.35 | 67.59 |
VIT_04s0008g05240.t01 | Wine grape | cytosol | 71.09 | 67.51 |
PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 70.82 | 67.09 |
KRH52458 | Soybean | extracellular | 68.44 | 65.98 |
KRH61786 | Soybean | cytosol, nucleus, plastid | 67.64 | 65.22 |
KRH05133 | Soybean | mitochondrion | 68.44 | 61.72 |
GSMUA_Achr7P10070_001 | Banana | cytosol | 62.07 | 60.62 |
Zm00001d009799_P001 | Maize | plastid | 64.19 | 59.61 |
Zm00001d037640_P001 | Maize | plastid | 63.13 | 58.62 |
HORVU1Hr1G025480.1 | Barley | nucleus, peroxisome, vacuole | 63.66 | 58.11 |
Os05t0171300-01 | Rice | mitochondrion, plastid | 63.66 | 57.83 |
TraesCS1A01G115500.1 | Wheat | golgi | 63.13 | 57.63 |
TraesCS1B01G135400.1 | Wheat | cytosol | 62.33 | 57.04 |
TraesCS1D01G116900.1 | Wheat | cytosol | 62.6 | 56.87 |
EES17800 | Sorghum | cytosol | 63.13 | 56.8 |
GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 59.95 | 56.22 |
Os06t0602700-01 | Rice | plastid | 62.86 | 56.03 |
Zm00001d046400_P002 | Maize | mitochondrion | 61.54 | 55.24 |
EER90006 | Sorghum | plastid | 61.27 | 54.87 |
TraesCS7D01G483000.1 | Wheat | cytosol | 61.54 | 54.85 |
TraesCS7B01G401600.1 | Wheat | cytosol | 61.54 | 54.72 |
GSMUA_Achr7P10000_001 | Banana | mitochondrion | 33.69 | 54.51 |
HORVU7Hr1G111040.2 | Barley | cytosol | 61.01 | 54.5 |
Os02t0202400-01 | Rice | plastid | 56.76 | 50.35 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 59.68 | 50.34 |
TraesCS6B01G210000.1 | Wheat | plastid | 56.5 | 49.65 |
TraesCS6D01G168200.1 | Wheat | golgi | 55.97 | 49.18 |
TraesCS6A01G175100.1 | Wheat | plastid | 56.23 | 48.96 |
EES04720 | Sorghum | plastid | 54.11 | 46.9 |
Zm00001d015746_P001 | Maize | plastid | 53.58 | 46.22 |
CDY29805 | Canola | cytosol | 31.57 | 34.2 |
CDY25400 | Canola | cytosol, plastid | 31.57 | 34.2 |
CDY01954 | Canola | mitochondrion | 17.77 | 34.01 |
CDX82257 | Canola | cytosol | 31.3 | 33.91 |
CDY36050 | Canola | cytosol, plastid | 30.77 | 33.33 |
CDY07175 | Canola | cytosol | 30.77 | 33.14 |
CDY48505 | Canola | cytosol | 30.77 | 33.14 |
CDX71722 | Canola | cytosol | 29.44 | 32.84 |
CDY11371 | Canola | cytosol | 29.44 | 32.74 |
CDX91877 | Canola | cytosol | 30.24 | 32.29 |
CDX74363 | Canola | cytosol | 30.24 | 32.29 |
CDY66909 | Canola | cytosol, mitochondrion, plastid | 10.08 | 31.15 |
CDY59491 | Canola | cytosol | 27.59 | 30.59 |
CDX70930 | Canola | cytosol | 15.65 | 30.41 |
CDY68466 | Canola | cytosol | 26.79 | 30.33 |
CDY07764 | Canola | plastid | 27.32 | 30.29 |
CDX94361 | Canola | cytosol | 26.53 | 29.94 |
CDX84024 | Canola | cytosol | 25.73 | 29.48 |
CDX96850 | Canola | cytosol | 25.73 | 29.31 |
CDY18420 | Canola | plastid | 26.79 | 29.28 |
CDX93344 | Canola | plastid | 26.53 | 28.99 |
CDY13155 | Canola | cytosol | 26.79 | 28.86 |
CDY40244 | Canola | plastid | 25.46 | 28.66 |
CDY56673 | Canola | cytosol | 25.73 | 28.61 |
CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 24.67 | 28.44 |
CDX76183 | Canola | cytosol | 26.26 | 28.29 |
CDY19928 | Canola | cytosol | 24.93 | 28.06 |
CDY31292 | Canola | cytosol | 25.2 | 27.14 |
CDX79251 | Canola | plastid | 28.38 | 26.88 |
CDX85385 | Canola | cytosol | 23.87 | 26.71 |
CDX86261 | Canola | cytosol | 23.87 | 26.71 |
CDX68026 | Canola | plastid | 28.12 | 26.7 |
CDY14527 | Canola | plastid | 28.91 | 26.14 |
CDY41199 | Canola | plastid | 24.93 | 26.11 |
CDY08834 | Canola | plastid | 28.91 | 26.08 |
CDX97455 | Canola | plastid | 10.34 | 25.83 |
CDY67915 | Canola | cytosol | 16.71 | 25.0 |
CDX80771 | Canola | cytosol, plastid | 26.53 | 24.75 |
CDY11199 | Canola | plastid | 26.53 | 24.69 |
CDY23168 | Canola | plastid | 24.14 | 23.88 |
CDX95305 | Canola | plastid | 24.14 | 23.88 |
CDY33993 | Canola | plastid | 22.55 | 23.81 |
CDY55175 | Canola | cytosol | 27.06 | 21.79 |
CDY14050 | Canola | cytosol | 26.53 | 21.37 |
CDX70028 | Canola | cytosol | 22.02 | 20.91 |
CDY00231 | Canola | cytosol | 26.26 | 20.75 |
CDX86953 | Canola | cytosol | 26.26 | 20.75 |
CDY05832 | Canola | cytosol | 26.26 | 19.8 |
CDX71683 | Canola | cytosol | 26.26 | 19.8 |
CDX98981 | Canola | endoplasmic reticulum, golgi | 21.22 | 18.78 |
CDY39471 | Canola | cytosol | 17.77 | 16.71 |
Protein Annotations
EnsemblPlants:CDX68841 | EnsemblPlantsGene:GSBRNA2T00130565001 | Gene3D:1.50.40.10 | GO:A0A078BVJ1 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
PANTHER:PTHR24089 | PANTHER:PTHR24089:SF662 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | ProteinID:CDX68841 |
ProteinID:CDX68841.1 | SEG:seg | SUPFAM:SSF103506 | UniParc:UPI0004EEA215 | MapMan:24.2.13 | : |
Description
BnaC01g06120D
Coordinates
chrLK031789:+:1529478..1531351
Molecular Weight (calculated)
40529.2 Da
IEP (calculated)
9.656
GRAVY (calculated)
0.018
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTGIQLFD DSRNGLFSVS DLGCDWSLTG VNHHHSIGAL FASVNQTNPF GSGSVSSPGK WKSGKVEEWE ELVNGEKKKN GGGGMKLKIK IGNPSLRRLI
101: SGAVAGAVSR TVVAPLETIR THLMVGSGGN SSTEVFGDIM KHEGWTGLFR GNLVNVIRVA PARAVELFVF ETVNKKLSPE HGEQSKIPIP ASLLAGACAG
201: VSQTLLTYPL ELVKTRLTIQ RGVYKGIFDA FVKIIREEGP TELYRGLAPS LIGVVPYAAT NYFAYDSLRK AYRSFSKQEK IGNIETLLIG SLAGALSSTA
301: TFPLEVARKH MQVGAVSGRV VYKNMLDALV SILEHEGILG WYKGLGPSCL KLVPAAGISF MCYEACKKIL VENNQEA
101: SGAVAGAVSR TVVAPLETIR THLMVGSGGN SSTEVFGDIM KHEGWTGLFR GNLVNVIRVA PARAVELFVF ETVNKKLSPE HGEQSKIPIP ASLLAGACAG
201: VSQTLLTYPL ELVKTRLTIQ RGVYKGIFDA FVKIIREEGP TELYRGLAPS LIGVVPYAAT NYFAYDSLRK AYRSFSKQEK IGNIETLLIG SLAGALSSTA
301: TFPLEVARKH MQVGAVSGRV VYKNMLDALV SILEHEGILG WYKGLGPSCL KLVPAAGISF MCYEACKKIL VENNQEA
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.