CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40244	Canola	plastid	91.94	98.81
Bra007181.1-P	Field mustard	plastid	94.72	95.79
AT3G55640.4	Thale cress	plastid	84.44	91.57
KRH73096	Soybean	cytosol	65.56	72.17
KRH15037	Soybean	cytosol	65.0	71.78
VIT_13s0019g02440.t01	Wine grape	cytosol	65.56	65.37
GSMUA_Achr8P02430_001	Banana	cytosol	61.67	63.25
CDY59491	Canola	cytosol	59.72	63.24
CDY07764	Canola	plastid	59.72	63.24
TraesCS4B01G211000.1	Wheat	plastid	58.33	62.69
Zm00001d047838_P001	Maize	cytosol	59.72	62.68
HORVU4Hr1G060540.1	Barley	cytosol	59.44	62.57
OQU92863	Sorghum	cytosol	60.0	62.43
Os01t0143100-01	Rice	mitochondrion	55.83	62.42
TraesCS4D01G211700.2	Wheat	cytosol	59.44	62.39
GSMUA_Achr10P...	Banana	cytosol	58.33	62.31
TraesCS4A01G093400.1	Wheat	cytosol	59.17	62.28
Os03t0267700-01	Rice	cytosol	59.44	61.85
CDX93344	Canola	plastid	58.89	61.45
Zm00001d039884_P002	Maize	cytosol	55.83	61.28
CDY18420	Canola	plastid	58.61	61.16
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	55.28	60.49
EES00336	Sorghum	cytosol	55.28	60.3
CDX76183	Canola	cytosol	58.61	60.29
CDY13155	Canola	cytosol	58.61	60.29
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	55.0	60.18
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	55.0	60.18
OQU92679	Sorghum	cytosol	19.17	55.65
GSMUA_Achr6P33950_001	Banana	plastid	61.39	55.25
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	55.28	53.49
CDX68843	Canola	cytosol	12.22	33.59
CDX71722	Canola	cytosol	29.72	31.66
CDX70930	Canola	cytosol	16.94	31.44
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	28.33	31.19
CDX84024	Canola	cytosol	28.33	31.0
CDY11371	Canola	cytosol	29.17	30.97
CDY01954	Canola	mitochondrion	16.94	30.96
CDX96850	Canola	cytosol	28.33	30.82
CDX94361	Canola	cytosol	28.33	30.54
CDY68466	Canola	cytosol	27.78	30.03
CDY07175	Canola	cytosol	28.61	29.43
CDY48505	Canola	cytosol	28.61	29.43
CDX74363	Canola	cytosol	28.33	28.9
CDX91877	Canola	cytosol	28.06	28.61
CDY67915	Canola	cytosol	20.0	28.57
CDX97455	Canola	plastid	11.94	28.48
CDY66909	Canola	cytosol, mitochondrion, plastid	9.17	27.05
CDX85385	Canola	cytosol	25.28	27.0
CDX86261	Canola	cytosol	25.28	27.0
CDY19928	Canola	cytosol	25.0	26.87
CDY56673	Canola	cytosol	25.0	26.55
CDX95305	Canola	plastid	26.94	25.46
CDY23168	Canola	plastid	26.94	25.46
CDX68841	Canola	cytosol	26.11	24.93
CDX75241	Canola	cytoskeleton, cytosol, nucleus	26.39	24.87
CDX76755	Canola	cytosol	27.22	24.69
CDY11524	Canola	cytosol	27.22	24.62
CDX70028	Canola	cytosol	25.28	22.92
CDX80771	Canola	cytosol, plastid	25.56	22.77
CDY11199	Canola	plastid	25.56	22.72
CDX82257	Canola	cytosol	21.94	22.7
CDX68026	Canola	plastid	24.72	22.42
CDY36050	Canola	cytosol, plastid	21.39	22.13
CDY29805	Canola	cytosol	21.39	22.13
CDY25400	Canola	cytosol, plastid	21.39	22.13
CDX79251	Canola	plastid	24.44	22.11
CDY14527	Canola	plastid	25.56	22.06
CDY08834	Canola	plastid	25.56	22.01
CDY00231	Canola	cytosol	28.89	21.8
CDX86953	Canola	cytosol	28.89	21.8
CDY55175	Canola	cytosol	28.06	21.58
CDY14050	Canola	cytosol	28.06	21.58
CDY05832	Canola	cytosol	29.44	21.2
CDY31292	Canola	cytosol	20.56	21.14
CDX71683	Canola	cytosol	29.17	21.0
CDY33993	Canola	plastid	18.89	19.05
CDX98981	Canola	endoplasmic reticulum, golgi	21.67	18.31
CDY39471	Canola	cytosol	19.44	17.46

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078HV13	UniProt:A0A078HV13	EnsemblPlants:CDY41199	ProteinID:CDY41199
ProteinID:CDY41199.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00072609001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403
SUPFAM:SSF103506	UniParc:UPI0004EF38BB	SEG:seg	:	:	:

Description

BnaC08g26590DBnaC08g26590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV13]

Coordinates

chrLK032493:-:13864..16648

Molecular Weight (calculated)

39541.1 Da

IEP (calculated)

10.081

GRAVY (calculated)

0.126

Length

360 amino acids

Sequence
(BLAST)

001: MVMRTEARVS VSSGQSVVGN KASSHRLTQD QRSHIESASQ LLAGGIAGAF SKTCTAPLSR LTILFQVQGM HTNAAALKKP SILHEASRIL NEEGLKAFWK
101: GNLVTIAHRL PYSSVNFYTY EHYKKFLYMV TGMENHRESI SSNVFVHFVA GGLAGITAAS ATYPLDLVRT RLAAQTKVIY YTGIWHTLRT ISTDEGILGL
201: YKGLGTTLVG VGPSIAISFS AYESLRSYWM SNRPHDSPVV VSLACGSLSG IASSTVSQLL DQTQLISLLL QIVQFTTDFV STFPLDLVRR RKQLEGIGGR
301: AVVYKTGLFG TLKRIIKTEG VRGLYRGILP EYYKVVPGVG ICFMTYETLK LYFMDLSSKL

Best Arabidopsis Sequence Match ( AT3G55640.4 )
(BLAST)

001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL

Arabidopsis Description

Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.