Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P25060_001 Banana cytosol, mitochondrion, plastid 83.61 66.67
CDY48505 Canola cytosol 98.36 34.29
CDY07175 Canola cytosol 98.36 34.29
CDX74363 Canola cytosol 94.26 32.58
CDX91877 Canola cytosol 94.26 32.58
Bra000944.1-P Field mustard cytosol 93.44 32.29
AT4G01100.2 Thale cress cytosol 94.26 31.42
Os05t0585900-01 Rice cytosol, mitochondrion 90.16 30.99
KRH47947 Soybean mitochondrion 88.52 30.42
KRH06509 Soybean cytosol 88.52 30.42
HORVU1Hr1G092860.1 Barley cytosol 87.7 30.23
EES20024 Sorghum cytosol 87.7 30.14
TraesCS1D01G434000.1 Wheat cytosol 86.89 29.94
TraesCS1B01G459400.1 Wheat cytosol 86.89 29.94
TraesCS1A01G425000.1 Wheat cytosol 86.89 29.94
VIT_15s0046g01290.t01 Wine grape cytosol 86.07 29.66
GSMUA_Achr3P32000_001 Banana cytosol 86.07 29.41
PGSC0003DMT400049872 Potato cytosol 84.43 29.01
Solyc10g011670.2.1 Tomato cytosol 84.43 29.01
GSMUA_Achr7P24620_001 Banana cytosol 84.43 28.85
GSMUA_Achr2P06340_001 Banana cytosol 83.61 28.49
KRG97138 Soybean cytosol 80.33 28.41
KRH68888 Soybean cytosol 79.51 28.12
CDY11371 Canola cytosol 77.87 28.02
Solyc01g095570.2.1 Tomato cytosol 80.33 27.61
CDX71722 Canola cytosol 76.23 27.51
PGSC0003DMT400000597 Potato cytosol 79.51 27.32
CDX94361 Canola cytosol 34.43 12.57
CDX84024 Canola cytosol 33.61 12.46
CDX96850 Canola cytosol 33.61 12.39
CDY68466 Canola cytosol 32.79 12.01
CDY45268 Canola endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 31.97 11.93
CDX70930 Canola cytosol 18.03 11.34
CDX97455 Canola plastid 13.11 10.6
CDX86953 Canola cytosol 40.98 10.48
CDY00231 Canola cytosol 40.16 10.27
CDY55175 Canola cytosol 39.34 10.26
CDY14050 Canola cytosol 39.34 10.26
CDX86261 Canola cytosol 27.87 10.09
CDX85385 Canola cytosol 27.87 10.09
CDX68841 Canola cytosol 31.15 10.08
CDY59491 Canola cytosol 27.87 10.0
CDY40244 Canola plastid 27.05 9.85
CDY07764 Canola plastid 27.05 9.71
CDX75241 Canola cytoskeleton, cytosol, nucleus 30.33 9.69
CDY18420 Canola plastid 27.05 9.57
CDX93344 Canola plastid 27.05 9.57
CDY33993 Canola plastid 27.87 9.52
CDY56673 Canola cytosol 26.23 9.44
CDY31292 Canola cytosol 27.05 9.43
CDX76755 Canola cytosol 30.33 9.32
CDX68026 Canola plastid 30.33 9.32
CDY11524 Canola cytosol 30.33 9.3
CDX79251 Canola plastid 30.33 9.3
CDY19928 Canola cytosol 25.41 9.25
CDY41199 Canola plastid 27.05 9.17
CDX80771 Canola cytosol, plastid 29.51 8.91
CDY11199 Canola plastid 29.51 8.89
CDY05832 Canola cytosol 36.07 8.8
CDX71683 Canola cytosol 36.07 8.8
CDX95305 Canola plastid 27.05 8.66
CDY23168 Canola plastid 27.05 8.66
CDY13155 Canola cytosol 24.59 8.57
CDX76183 Canola cytosol 24.59 8.57
CDX98981 Canola endoplasmic reticulum, golgi 29.51 8.45
CDY14527 Canola plastid 28.69 8.39
CDY08834 Canola plastid 28.69 8.37
CDY67915 Canola cytosol 16.39 7.94
CDX70028 Canola cytosol 25.41 7.81
CDY39471 Canola cytosol 25.41 7.73
CDX82257 Canola cytosol 18.85 6.61
CDY25400 Canola cytosol, plastid 18.03 6.32
CDY29805 Canola cytosol 18.03 6.32
CDY36050 Canola cytosol, plastid 18.03 6.32
GSMUA_Achr8P25070_001 Banana endoplasmic reticulum, plasma membrane, plastid 12.3 5.28
CDX68843 Canola cytosol 0.82 0.76
CDY01954 Canola mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13GO:A0A078JJK4UniProt:A0A078JJK4EnsemblPlants:CDY66909ProteinID:CDY66909
ProteinID:CDY66909.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00056831001InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sfPFAM:PF00153PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF623
SUPFAM:SSF103506UniParc:UPI0004EF096D::::
Description
BnaCnng52820DBnaCnng52820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJK4]
Coordinates
chrLK035573:+:6677..7290
Molecular Weight (calculated)
13103.8 Da
IEP (calculated)
10.199
GRAVY (calculated)
-0.096
Length
122 amino acids
Sequence
(BLAST)
001: MATEDVKRSE SAAVSTIVNL AEEAREGVKA PGYAVLSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYNGTV QGLKYIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SK
Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)
001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD
Arabidopsis Description
ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.