CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49196	Soybean	endoplasmic reticulum	76.2	92.0
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	78.01	77.78
KRH15037	Soybean	cytosol	73.8	75.15
KRH73096	Soybean	cytosol	72.59	73.7
VIT_08s0007g01280.t01	Wine grape	cytosol	73.8	72.92
PGSC0003DMT400062351	Potato	cytosol	73.8	69.6
OQU92679	Sorghum	cytosol	25.9	69.35
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	73.8	69.01
Zm00001d047838_P001	Maize	cytosol	70.48	68.22
GSMUA_Achr10P...	Banana	cytosol	68.67	67.66
OQU92863	Sorghum	cytosol	70.48	67.63
Os03t0267700-01	Rice	cytosol	69.58	66.76
GSMUA_Achr8P02430_001	Banana	cytosol	70.48	66.67
TraesCS4B01G211000.1	Wheat	plastid	67.17	66.57
Os01t0143100-01	Rice	mitochondrion	63.55	65.53
HORVU4Hr1G060540.1	Barley	cytosol	67.47	65.5
TraesCS4A01G093400.1	Wheat	cytosol	67.47	65.5
TraesCS4D01G211700.2	Wheat	cytosol	67.47	65.31
Zm00001d039884_P002	Maize	cytosol	64.46	65.24
EES00336	Sorghum	cytosol	64.46	64.85
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	61.75	62.31
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	61.75	62.31
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	61.14	61.7
GSMUA_Achr6P33950_001	Banana	plastid	70.18	58.25
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	62.05	55.38
KRH27854	Soybean	cytosol	33.43	33.64
KRH77631	Soybean	cytosol	33.13	33.33
KRG97138	Soybean	cytosol	32.83	31.59
KRH68888	Soybean	cytosol	32.53	31.3
KRH49045	Soybean	cytosol	30.42	31.27
KRH15889	Soybean	endoplasmic reticulum	21.99	30.54
KRH47947	Soybean	mitochondrion	32.23	30.14
KRH06509	Soybean	cytosol	32.23	30.14
KRH61524	Soybean	cytosol	29.22	28.61
KRH52207	Soybean	cytosol	28.31	27.81
KRH75891	Soybean	cytosol, peroxisome	15.36	26.42
KRH65751	Soybean	plastid	30.12	26.04
KRH49367	Soybean	plastid	29.82	25.92
KRH37122	Soybean	cytosol	25.6	25.91
KRH12112	Soybean	cytosol	25.3	25.61
KRH50868	Soybean	cytosol	25.3	25.38
KRH02242	Soybean	cytosol	24.7	25.08
KRH61786	Soybean	cytosol, nucleus, plastid	29.52	25.06
KRH52458	Soybean	extracellular	28.61	24.3
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	23.19	24.29
KRH62352	Soybean	cytosol, peroxisome, plastid	28.31	22.6
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	28.01	22.36
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	26.81	21.76
KRH43178	Soybean	plastid	26.51	21.2
KRG94737	Soybean	cytosol	30.42	21.17
KRH06795	Soybean	cytosol	30.12	21.14
KRH05133	Soybean	mitochondrion	26.51	21.05
KRH63894	Soybean	cytosol	28.31	20.09
KRH41046	Soybean	cytosol	28.92	19.51
KRH70079	Soybean	cytosol	28.31	19.46
KRH54061	Soybean	cytosol	27.71	19.33
KRH59718	Soybean	cytosol	28.61	19.0
KRH46981	Soybean	plastid	20.18	17.59
KRH44680	Soybean	extracellular	19.88	17.46

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100788060	MapMan:24.2.13	EMBL:ACUP02011370	EnsemblPlantsGene:GLYMA_18G189300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1N2N7	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH00061
ProteinID:KRH00061	ProteinID:KRH00061.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI000233E3E9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:45694121..45697273

Molecular Weight (calculated)

36380.1 Da

IEP (calculated)

10.243

GRAVY (calculated)

-0.018

Length

332 amino acids

Sequence
(BLAST)

001: MEAARVGVAV EGGHGNKSNN VKMLQQPKNQ QAQMGTVSQL LAGGLAGAFA KTCTAPLARL TILFQLHGMH FDVAALSKPS IWGEASRIVN EEGFRAFWKG
101: NLVTIAHRLP YSSVSFYAYE RYKNLLHMLL REKHRGNTSA DHFVHFVGGG LSGITAATAT YPLDLVRTRL AAQRSSMYYR GISHAFTTIC RDEGFLGLYK
201: GLGATLLGVG PNIAISFSVY ESLRSCWQSR RPDDSTVMIS LACGSLSGVA SSTATFPLDL VRRRKQLEGA GGRARVYNTS LFGTFKHIIQ NEGVRGLYRG
301: ILPEYYKVVP SLGIVFMTYE TLKMLLSSIP RD

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.