CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49196	Soybean	endoplasmic reticulum	65.47	79.27
KRH00061	Soybean	cytosol	77.78	78.01
KRH15037	Soybean	cytosol	70.87	72.39
KRH73096	Soybean	cytosol	70.87	72.17
Zm00001d047838_P001	Maize	cytosol	69.97	67.93
OQU92863	Sorghum	cytosol	69.97	67.34
Bra000026.1-P	Field mustard	plastid	68.47	67.06
CDY07764	Canola	plastid	68.47	67.06
CDY59491	Canola	cytosol	67.87	66.47
CDX76183	Canola	cytosol	69.67	66.29
CDY13155	Canola	cytosol	69.67	66.29
Os03t0267700-01	Rice	cytosol	68.77	66.19
Os01t0143100-01	Rice	mitochondrion	63.96	66.15
Bra017151.1-P	Field mustard	plastid	68.47	66.09
CDY18420	Canola	plastid	68.47	66.09
AT3G53940.1	Thale cress	cytosol	72.07	65.75
Zm00001d039884_P002	Maize	cytosol	64.56	65.55
CDX93344	Canola	plastid	67.87	65.51
TraesCS4B01G211000.1	Wheat	plastid	65.77	65.37
OQU92679	Sorghum	cytosol	24.32	65.32
GSMUA_Achr8P02430_001	Banana	cytosol	68.77	65.24
Bra014855.1-P	Field mustard	cytosol	69.97	65.08
HORVU4Hr1G060540.1	Barley	cytosol	66.67	64.91
TraesCS4A01G093400.1	Wheat	cytosol	66.37	64.62
EES00336	Sorghum	cytosol	63.96	64.55
AT2G37890.1	Thale cress	cytosol	65.17	64.39
TraesCS4D01G211700.2	Wheat	cytosol	66.07	64.14
GSMUA_Achr10P...	Banana	cytosol	64.86	64.09
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	60.06	60.79
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	59.76	60.49
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	59.76	60.49
GSMUA_Achr6P33950_001	Banana	plastid	68.17	56.75
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	60.06	53.76
KRH27854	Soybean	cytosol	34.53	34.85
KRH77631	Soybean	cytosol	34.23	34.55
KRG97138	Soybean	cytosol	34.83	33.62
KRH68888	Soybean	cytosol	34.53	33.33
KRH06509	Soybean	cytosol	34.83	32.68
KRH47947	Soybean	mitochondrion	34.83	32.68
KRH15889	Soybean	endoplasmic reticulum	22.52	31.38
KRH49045	Soybean	cytosol	30.33	31.27
KRH61524	Soybean	cytosol	29.73	29.2
KRH52207	Soybean	cytosol	29.43	28.99
KRH37122	Soybean	cytosol	27.93	28.35
KRH50868	Soybean	cytosol	27.93	28.1
KRH12112	Soybean	cytosol	27.63	28.05
KRH02242	Soybean	cytosol	27.33	27.83
KRH75891	Soybean	cytosol, peroxisome	15.62	26.94
KRH49367	Soybean	plastid	30.33	26.44
KRH65751	Soybean	plastid	30.33	26.3
KRH61786	Soybean	cytosol, nucleus, plastid	30.63	26.09
KRH52458	Soybean	extracellular	30.33	25.83
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	22.82	23.97
KRH62352	Soybean	cytosol, peroxisome, plastid	29.13	23.32
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	29.13	23.32
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	28.53	23.23
KRH43178	Soybean	plastid	28.23	22.65
KRG94737	Soybean	cytosol	32.43	22.64
KRH63894	Soybean	cytosol	31.53	22.44
KRH06795	Soybean	cytosol	31.83	22.41
KRH05133	Soybean	mitochondrion	27.63	22.01
KRH54061	Soybean	cytosol	30.93	21.64
KRH41046	Soybean	cytosol	30.93	20.93
KRH70079	Soybean	cytosol	30.33	20.91
KRH59718	Soybean	cytosol	30.63	20.4
KRH44680	Soybean	extracellular	22.82	20.11
KRH46981	Soybean	plastid	21.92	19.16

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100777563	MapMan:24.2.13	EMBL:ACUP02001803	EnsemblPlantsGene:GLYMA_03G070700	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1JM12	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH65929
ProteinID:KRH65929	ProteinID:KRH65929.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI0002336C5D

Description

hypothetical protein

Coordinates

chr3:-:16863287..16867630

Molecular Weight (calculated)

35916.5 Da

IEP (calculated)

10.029

GRAVY (calculated)

0.145

Length

333 amino acids

Sequence
(BLAST)

001: MEARVGMVVE GGQRTLNADS GGAAKFLVAQ NNRQLGTVHQ LLAGGISGAF SKTCTAPLAR LTILFQVQGM HSDVAALSNP SILREASRII NEEGFRAFWK
101: GNMVTIAHRL PYTAVNFYAY ERYKNVLHSL MGENVSGNSG ANLLVHFVGG GLSGITSASA TYPLDLVRTR LAAQRSTMYY RGISHAFSTI CRDEGFLGLY
201: KGLGATLLGV GPSIAISFAV YEWLRSVWQS QRPDDSKAVV GLACGSLSGI ASSTATFPLD LVRRRMQLEG VGGRARVYNT GLFGAFGRII QTEGVRGLYR
301: GILPEYYKVV PGVGIVFMTY ETLKMLLSSI SSY

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.