CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008770.1.1	Tomato	extracellular	73.99	70.71
PGSC0003DMT400000910	Potato	cytosol	73.06	69.01
VIT_11s0016g02470.t01	Wine grape	cytosol	71.83	68.04
Bra026457.1-P	Field mustard	cytosol	69.35	67.07
CDX94361	Canola	cytosol	69.04	66.77
CDY68466	Canola	cytosol	68.73	66.67
AT4G26180.1	Thale cress	cytosol	68.11	66.47
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	67.18	64.78
KXG29836	Sorghum	cytosol, mitochondrion, plastid	66.87	64.29
GSMUA_Achr10P...	Banana	cytosol	69.04	64.27
TraesCS6D01G176300.3	Wheat	cytosol	66.25	63.88
TraesCS6B01G231800.3	Wheat	cytosol	66.25	63.88
TraesCS6A01G187900.2	Wheat	cytosol	65.94	63.58
HORVU6Hr1G042080.7	Barley	cytosol	65.33	62.8
TraesCS7D01G056700.1	Wheat	cytosol	64.71	60.93
TraesCS7A01G061900.2	Wheat	cytosol	63.16	60.9
GSMUA_Achr7P09310_001	Banana	cytosol	60.99	56.94
TraesCS4A01G428000.1	Wheat	mitochondrion	64.09	53.77
KRH52207	Soybean	cytosol	54.8	52.37
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	57.59	52.1
KRH61524	Soybean	cytosol	54.18	51.62
TraesCS4A01G427000.1	Wheat	mitochondrion	58.51	50.53
KRH27854	Soybean	cytosol	35.91	35.15
KRH77631	Soybean	cytosol	35.6	34.85
KRG97138	Soybean	cytosol	34.67	32.46
KRH68888	Soybean	cytosol	34.67	32.46
KRH49196	Soybean	endoplasmic reticulum	27.55	32.36
KRH47947	Soybean	mitochondrion	35.29	32.11
KRH06509	Soybean	cytosol	34.98	31.83
KRH73096	Soybean	cytosol	31.27	30.89
KRH15037	Soybean	cytosol	30.96	30.67
KRH00061	Soybean	cytosol	31.27	30.42
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	31.27	30.33
KRH15889	Soybean	endoplasmic reticulum	21.98	29.71
KRH75891	Soybean	cytosol, peroxisome	16.72	27.98
KRH12112	Soybean	cytosol	27.86	27.44
KRH37122	Soybean	cytosol	27.86	27.44
KRH50868	Soybean	cytosol	27.24	26.59
KRH02242	Soybean	cytosol	26.63	26.3
KRH65751	Soybean	plastid	29.1	24.48
KRH49367	Soybean	plastid	28.79	24.35
KRH52458	Soybean	extracellular	28.48	23.53
KRH61786	Soybean	cytosol, nucleus, plastid	28.17	23.27
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	27.24	21.52
KRH05133	Soybean	mitochondrion	27.55	21.29
KRH43178	Soybean	plastid	27.24	21.2
KRH06795	Soybean	cytosol	30.96	21.14
KRG94737	Soybean	cytosol	30.96	20.96
KRH62352	Soybean	cytosol, peroxisome, plastid	26.93	20.91
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	26.93	20.91
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	20.43	20.82
KRH70079	Soybean	cytosol	30.65	20.5
KRH63894	Soybean	cytosol	29.1	20.09
KRH54061	Soybean	cytosol	29.41	19.96
KRH41046	Soybean	cytosol	29.41	19.31
KRH59718	Soybean	cytosol	29.72	19.2
KRH44680	Soybean	extracellular	22.29	19.05
KRH46981	Soybean	plastid	22.29	18.9

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100783383	MapMan:24.2.13	EMBL:ACUP02004330	EnsemblPlantsGene:GLYMA_07G128500	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0015217	GO:GO:0015228
GO:GO:0015866	GO:GO:0016020	GO:GO:0016021	GO:GO:0035349	GO:GO:0055085	GO:GO:0080121
GO:GO:0080122	InterPro:Graves_DC	UniProt:I1KJU8	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH49045
ProteinID:KRH49045	ProteinID:KRH49045.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PRINTS:PR00928	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF245	SUPFAM:SSF103506
TMHMM:TMhelix	UniParc:UPI0002338C0C	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:15347476..15349798

Molecular Weight (calculated)

35815.9 Da

IEP (calculated)

10.154

GRAVY (calculated)

-0.015

Length

323 amino acids

Sequence
(BLAST)

001: MAKQRQEDGK KGVVDLMPLF AKELLAGGVA GGFAKTVVAP LERVKILFQT RRTEFQSTGL IGSAVRIAKT EGLLGFYRGN GASVARIIPY AAIHYMSYEE
101: YRRWIIQTFP HVWKGPTLDL VAGSLSGGTA VLFTYPLDLT RTKLAYQIVS PKKLNASGMV NNEQVYRGIL DCLAKTYKEG GIRGLYRGVA PTLVGIFPYA
201: GLKFYFYEEM KRHVPEEYNK SIMAKLTCGS VAGLLGQTIT YPLEVVRRQM QVQKLLPSDN AELKGTLKSV VFIAQKQGWK QLFSGLSINY IKVVPSVAIG
301: FTVYDSMKSY LRVPSRDEAA VEN

Best Arabidopsis Sequence Match ( AT4G26180.1 )
(BLAST)

001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T

Arabidopsis Description

COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.