Factsheet for VIT_08s0007g01280.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02440.t01	Wine grape	cytosol	81.25	75.62
KRH49196	Soybean	endoplasmic reticulum	61.01	74.55
PGSC0003DMT400062351	Potato	cytosol	77.38	73.86
KRH00061	Soybean	cytosol	72.92	73.8
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	77.08	72.96
GSMUA_Achr8P02430_001	Banana	cytosol	73.81	70.66
GSMUA_Achr10P...	Banana	cytosol	69.94	69.73
Bra000026.1-P	Field mustard	plastid	70.54	69.71
CDY07764	Canola	plastid	70.54	69.71
CDY59491	Canola	cytosol	70.24	69.41
Zm00001d047838_P001	Maize	cytosol	70.83	69.39
OQU92863	Sorghum	cytosol	70.83	68.79
AT3G53940.1	Thale cress	cytosol	74.7	68.77
Os03t0267700-01	Rice	cytosol	70.54	68.5
CDY13155	Canola	cytosol	71.13	68.29
CDX76183	Canola	cytosol	71.13	68.29
TraesCS4B01G211000.1	Wheat	plastid	67.86	68.06
Bra014855.1-P	Field mustard	cytosol	72.32	67.88
CDY18420	Canola	plastid	69.35	67.54
Os01t0143100-01	Rice	mitochondrion	64.58	67.39
CDX93344	Canola	plastid	69.05	67.25
Bra017151.1-P	Field mustard	plastid	69.05	67.25
TraesCS4A01G093400.1	Wheat	cytosol	68.15	66.96
Zm00001d039884_P002	Maize	cytosol	65.18	66.77
TraesCS4D01G211700.2	Wheat	cytosol	68.15	66.76
HORVU4Hr1G060540.1	Barley	cytosol	67.86	66.67
EES00336	Sorghum	cytosol	65.48	66.67
OQU92679	Sorghum	cytosol	24.4	66.13
AT2G37890.1	Thale cress	cytosol	65.48	65.28
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	61.31	62.61
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	61.31	62.61
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	61.01	62.31
GSMUA_Achr6P33950_001	Banana	plastid	72.92	61.25
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	61.61	55.65
VIT_02s0025g01180.t01	Wine grape	cytosol	34.82	33.05
VIT_15s0046g01290.t01	Wine grape	cytosol	33.04	31.36
VIT_11s0016g02470.t01	Wine grape	cytosol	30.06	29.62
VIT_04s0008g01060.t01	Wine grape	cytosol	29.46	28.78
VIT_05s0020g01380.t01	Wine grape	cytosol	26.49	26.97
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	28.27	24.93
VIT_11s0016g05110.t01	Wine grape	cytosol	27.68	23.25
VIT_04s0008g05240.t01	Wine grape	cytosol	27.38	23.17
VIT_00s0665g00020.t01	Wine grape	plastid	26.79	21.79
VIT_09s0054g00790.t01	Wine grape	cytosol	22.62	21.35
VIT_14s0068g00890.t01	Wine grape	cytosol	30.95	21.27
VIT_18s0001g05620.t01	Wine grape	cytosol	27.08	20.54
VIT_17s0000g00030.t01	Wine grape	plastid	32.44	19.89
VIT_10s0042g01030.t01	Wine grape	cytosol	7.14	19.51

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100244349	wikigene:100244349	MapMan:24.2.13	EMBL:AM426746	ProteinID:CAN73411
ProteinID:CAN73411.1	ProteinID:CBI30477	ProteinID:CBI30477.3	UniProt:D7THG1	EMBL:FN595991	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100244349	wikigene:LOC100244349
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI00015C9498	ArrayExpress:VIT_08s0007g01280	EnsemblPlantsGene:VIT_08s0007g01280
EnsemblPlants:VIT_08s0007g01280.t01	RefSeq:XP_002272651	RefSeq:XP_002272651.1	:	:	:

Description

No Description!

Coordinates

chr8:-:15372082..15377999

Molecular Weight (calculated)

36444.0 Da

IEP (calculated)

10.044

GRAVY (calculated)

0.091

Length

336 amino acids

Sequence
(BLAST)

001: MEARVVVEGG QRALNSGHGG VVDGGATRKF LQQQSQIGTV HQLLAGGIAG AFSKTCTAPL ARLTILFQVQ GMQSDVATLS KASIWHEASR IVHEEGFRAF
101: WKGNLVTIVH RLPYSSVNFY AYERYKSFLQ SISGIESHKG NVSADMSVHF VSGGLAGITA ASATYPLDLV RTRLAAQRNT IYYRGIGHAL HTICREEGFL
201: GLYKGIGATL LGVGPSIAIS FSVYEALRSS WHTQRPSDST IMVSLACGSL SGIASSTVTF PIDLVRRRMQ LEGVAGRARV YKTGLFGTFG HIIRSEGLRG
301: LYRGILPEYY KVVPGVGIAF MTYETLKRVL SQDFAE

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.