Factsheet for VIT_02s0025g01180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g01290.t01	Wine grape	cytosol	89.55	89.55
KRH77631	Soybean	cytosol	83.33	89.39
GSMUA_Achr7P24620_001	Banana	cytosol	88.98	88.24
GSMUA_Achr3P32000_001	Banana	cytosol	88.42	87.68
KRH27854	Soybean	cytosol	81.64	87.58
GSMUA_Achr2P06340_001	Banana	cytosol	87.85	86.87
Solyc08g082020.2.1	Tomato	cytosol	84.46	83.75
EES20024	Sorghum	cytosol	82.77	82.54
Os05t0585900-01	Rice	cytosol, mitochondrion	81.64	81.41
TraesCS1D01G434000.1	Wheat	cytosol	81.36	81.36
TraesCS1B01G459400.1	Wheat	cytosol	81.36	81.36
TraesCS1A01G425000.1	Wheat	cytosol	81.36	81.36
HORVU1Hr1G092860.1	Barley	cytosol	81.36	81.36
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	33.9	78.43
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	60.45	75.35
VIT_04s0008g01060.t01	Wine grape	cytosol	35.88	36.92
VIT_08s0007g01280.t01	Wine grape	cytosol	33.05	34.82
VIT_11s0016g02470.t01	Wine grape	cytosol	33.33	34.6
VIT_13s0019g02440.t01	Wine grape	cytosol	33.62	32.96
VIT_05s0020g01380.t01	Wine grape	cytosol	29.66	31.82
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	29.38	27.3
VIT_14s0068g00890.t01	Wine grape	cytosol	37.01	26.79
VIT_11s0016g05110.t01	Wine grape	cytosol	29.66	26.25
VIT_10s0042g01030.t01	Wine grape	cytosol	9.04	26.02
VIT_04s0008g05240.t01	Wine grape	cytosol	28.53	25.44
VIT_00s0665g00020.t01	Wine grape	plastid	29.1	24.94
VIT_17s0000g00030.t01	Wine grape	plastid	37.57	24.27
VIT_18s0001g05620.t01	Wine grape	cytosol	28.81	23.02
VIT_09s0054g00790.t01	Wine grape	cytosol	22.88	22.75

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100260448	wikigene:100260448	MapMan:24.2.13	ProteinID:CBI34457	ProteinID:CBI34457.3
UniProt:D7TVD2	EMBL:FN596251	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	EntrezGene:LOC100260448	wikigene:LOC100260448	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF648	SUPFAM:SSF103506
TIGR:TC58078	UniParc:UPI00015CCCC8	ArrayExpress:VIT_02s0025g01180	EnsemblPlantsGene:VIT_02s0025g01180	EnsemblPlants:VIT_02s0025g01180.t01	unigene:Vvi.11142
RefSeq:XP_002273414	RefSeq:XP_002273414.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:1137597..1144541

Molecular Weight (calculated)

38331.8 Da

IEP (calculated)

9.992

GRAVY (calculated)

0.036

Length

354 amino acids

Sequence
(BLAST)

001: MASEDVKTSE AAVSRIVNLA EEAKLAREGV KAPSHALLSV CKSLVAGGVA GGVSRTAVAP LERLKILLQV QNPHTIKYNG TIQGLKYIWK SEGFRGLFKG
101: NGTNCARIVP NSAVKFYSYE QASKGILWLY RQQPGNENAE LTPLLRLGAG ACAGIIAMSA TYPMDMVRGR LTVQTEKSPR QYRGIFHALS TVLREEGARA
201: LYKGWLPSVI GVIPYVGLNF AVYESLKDWL MKAKPFGLVE DSELGVTTRL ACGAAAGTVG QTVAYPLDVI RRRMQMVGWK DAASVVTGDG RGKAPLEYTG
301: MVDAFRKTVR HEGFGALYKG LVPNSVKVVP SIAIAFVTYE MVKDILGVEM RISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.