Factsheet for Solyc06g068720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074454	Potato	plastid	35.4	98.88
Solyc03g118090.2.1	Tomato	cytosol	79.4	79.08
KRH63894	Soybean	cytosol	71.8	76.71
KRH41046	Soybean	cytosol	75.2	76.42
KRH54061	Soybean	cytosol	72.6	76.26
KRH59718	Soybean	cytosol	76.2	76.2
GSMUA_AchrUn_...	Banana	cytosol	77.4	75.29
GSMUA_Achr8P26070_001	Banana	cytosol	76.0	73.79
AT5G51050.1	Thale cress	cytosol	73.2	73.49
CDY14050	Canola	cytosol	68.4	73.08
Bra028702.1-P	Field mustard	cytosol	68.0	72.65
CDY55175	Canola	cytosol	68.0	72.65
Bra035722.1-P	Field mustard	cytosol	72.4	72.55
CDY05832	Canola	cytosol	72.4	72.4
CDX71683	Canola	cytosol	72.4	72.4
GSMUA_Achr5P05990_001	Banana	cytosol	74.0	71.98
VIT_17s0000g00030.t01	Wine grape	plastid	78.8	71.9
CDX70028	Canola	cytosol	56.6	71.28
AT5G07320.1	Thale cress	cytosol	68.2	71.19
TraesCS7B01G278000.1	Wheat	cytosol, plastid	72.6	70.49
TraesCS7A01G376600.1	Wheat	cytosol, plastid	72.8	70.0
TraesCS7D01G372900.1	Wheat	cytosol, plastid	72.6	69.94
Os06t0604500-01	Rice	nucleus	72.0	69.9
Bra009271.1-P	Field mustard	cytosol	60.2	69.84
EER88619	Sorghum	cytosol, plastid	71.8	69.31
HORVU7Hr1G090020.9	Barley	mitochondrion	72.4	69.22
AT5G61810.1	Thale cress	cytosol	65.4	68.41
CDY00231	Canola	cytosol	64.0	67.09
CDX86953	Canola	cytosol	64.0	67.09
Bra019615.1-P	Field mustard	cytosol	63.8	66.88
KXG29744	Sorghum	plastid	70.0	66.29
Zm00001d053640_P001	Maize	plasma membrane	69.0	65.22
CDX98981	Canola	endoplasmic reticulum, golgi	55.4	65.02
Zm00001d046509_P002	Maize	plastid	71.2	64.49
Os02t0201500-00	Rice	plastid	70.0	60.34
Solyc08g082020.2.1	Tomato	cytosol	27.2	38.1
Solyc10g011670.2.1	Tomato	cytosol	26.6	37.46
Solyc01g095570.2.1	Tomato	cytosol	26.0	36.62
Solyc12g008770.1.1	Tomato	extracellular	21.6	31.95
Solyc08g062860.2.1	Tomato	cytosol	21.4	31.2
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	21.6	30.42
Solyc08g061090.2.1	Tomato	plastid	23.6	29.65
Solyc12g099630.1.1	Tomato	cytosol	13.2	28.09
Solyc01g067070.2.1	Tomato	cytosol	17.8	26.89
Solyc09g005250.2.1	Tomato	plastid	18.6	24.47
Solyc04g074130.2.1	Tomato	cytosol	21.0	24.25
Solyc03g123990.2.1	Tomato	cytosol	16.8	22.89
Solyc05g051560.2.1	Tomato	nucleus	19.2	22.59
Solyc04g056260.1.1	Tomato	cytosol, nucleus	18.8	22.07

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0015217	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR002048	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4C846
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFAM:PF13202	PFAM:PF13499
PRINTS:PR00926	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF454
SMART:SM00054	SUPFAM:SSF103506	SUPFAM:SSF47473	EnsemblPlantsGene:Solyc06g068720.2	EnsemblPlants:Solyc06g068720.2.1	UniParc:UPI0002766590
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:42596629..42603523

Molecular Weight (calculated)

55124.1 Da

IEP (calculated)

5.533

GRAVY (calculated)

-0.121

Length

500 amino acids

Sequence
(BLAST)

001: MSVAGEAVEH VNFPAMATKD RSGCCNPVKK AGPVSLDHVL SALGETKEER ESRIRSLFSF FDSDNAGYLD YAKIEKGLSA MQIPAEYKFA KELLNGCDAN
101: KDGRVDYQEF RKYMDDKEME LYRIFQDIDV EHSGCILPEE LWDALVNAGI ELDDDELARF VEHVDKDNNG IITFEEWRDF LLLYPHEATI ENIYQYLERV
201: CLVDIGEQTV IPEGISKHVH ASKYLIAGGV AGAASRTATA PLDRVKVILQ VQTTHASIGP AVKSIWKEGG LLGFFRGNGL NVLKVAPESA IKFYAYETLK
301: NAIGRARGVE DQRDIGTSGR LVAGGMAGAI AQTAIYPMDL VKTRLQTHSC ESGSVPSLRK LSKDIFIQEG PRAFYRGLVP SLLGIIPYAG IDLAAYETLK
401: DLSKVYILHD SEAGPLVQLG CGTISGALGA TCVYPLQVIR TRMQADSAYQ GMADVFRKTV QREGFRGFYK GLFPNLLKVV PAASITYLVY ESMKKSLDLD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.