Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38790 | Canola | nucleus | 5.88 | 3.6 |
| CDY46409 | Canola | nucleus | 9.41 | 3.04 |
| VIT_01s0026g00960.t01 | Wine grape | nucleus | 14.12 | 2.34 |
| KRG97481 | Soybean | nucleus | 16.47 | 2.14 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 14.12 | 2.12 |
| KRH31410 | Soybean | nucleus | 15.29 | 2.1 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 8.24 | 1.9 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 9.41 | 1.53 |
| VIT_01s0011g04850.t01 | Wine grape | nucleus | 10.59 | 1.52 |
Protein Annotations
| ArrayExpress:VIT_07s0005g05560 | EMBL:FN596502 | EnsemblPlants:VIT_07s0005g05560.t01 | EnsemblPlantsGene:VIT_07s0005g05560 | ProteinID:CBI37264 | ProteinID:CBI37264.3 |
| UniParc:UPI0001BE4A49 | UniProt:D7U3E7 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7:-:9655333..9655924
Molecular Weight (calculated)
9440.5 Da
IEP (calculated)
11.896
GRAVY (calculated)
-0.673
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MLMKRGCPLR LIVGETSKNA SHVLQKNRNS RINAITAKIT KESSTPRSTK CRVSMSGISK HTLATNPQSE NRRTKTLLDQ SIFGN
001: MGDARDNEAY EEELLDYEEE DEKVPDSGNK VNGEAVKKGY VGIHSSGFRD FLLKPELLRA IVDSGFEHPS EVQHECIPQA ILGMDVICQA KSGMGKTAVF
101: VLSTLQQIEP SPGQVSALVL CHTRELAYQI CNEFVRFSTY LPDTKVSVFY GGVNIKIHKD LLKNECPHIV VGTPGRVLAL AREKDLSLKN VRHFILDECD
201: KMLESLDMRR DVQEIFKMTP HDKQVMMFSA TLSKEIRPVC KKFMQDFLEN ETVSVRLFSF GVENSEWRLC SFGFIVLVWV SMFRAILMFH SKTHIFEEKR
301: WTRISPMEIY VDDEAKLTLH GLVQHYIKLS EMEKNRKLND LLDALDFNQV VIFVKSVSRA AELNKLLVEC NFPSICIHSG MSQEERLTRY KSFKEGHKRI
401: LVATDLVGRG IDIERVNIVI NYDMPDSADT YLHRVGRAGR FGTKGLAITF VASASDSEVL NQVQERFEVD IKELPEQIDT STYMPS
101: VLSTLQQIEP SPGQVSALVL CHTRELAYQI CNEFVRFSTY LPDTKVSVFY GGVNIKIHKD LLKNECPHIV VGTPGRVLAL AREKDLSLKN VRHFILDECD
201: KMLESLDMRR DVQEIFKMTP HDKQVMMFSA TLSKEIRPVC KKFMQDFLEN ETVSVRLFSF GVENSEWRLC SFGFIVLVWV SMFRAILMFH SKTHIFEEKR
301: WTRISPMEIY VDDEAKLTLH GLVQHYIKLS EMEKNRKLND LLDALDFNQV VIFVKSVSRA AELNKLLVEC NFPSICIHSG MSQEERLTRY KSFKEGHKRI
401: LVATDLVGRG IDIERVNIVI NYDMPDSADT YLHRVGRAGR FGTKGLAITF VASASDSEVL NQVQERFEVD IKELPEQIDT STYMPS
Arabidopsis Description
DEAD/DEAH box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4JWF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.