CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25750	Soybean	cytosol	7.28	44.12
KRG97481	Soybean	nucleus	45.47	42.97
Zm00001d024922_P001	Maize	nucleus	4.69	28.43
KRH07049	Soybean	nucleus	16.34	20.24
KRH57609	Soybean	nucleus	19.74	19.61
KRG94005	Soybean	nucleus	19.58	18.39
KRG99370	Soybean	nucleus	7.12	18.18
HORVU2Hr1G014490.1	Barley	plastid	5.34	18.03
KRH45764	Soybean	nucleus	13.27	17.01
KRH33693	Soybean	nucleus	5.83	16.9
OQU79091	Sorghum	nucleus	11.0	16.46
KRH74704	Soybean	nucleus	14.4	16.39
Zm00001d023630_P005	Maize	nucleus	12.14	16.09
TraesCS2B01G104800.2	Wheat	nucleus	12.14	15.53
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	5.18	15.46
VIT_07s0005g05560.t01	Wine grape	mitochondrion, plastid	2.1	15.29
KRH16191	Soybean	nucleus	9.06	15.14
KRG99221	Soybean	nucleus	11.49	14.88
TraesCS2D01G087000.1	Wheat	nucleus	11.33	14.49
KRH50366	Soybean	nucleus	13.92	14.05
KRH69438	Soybean	nucleus	11.0	13.55
KRG89293	Soybean	nucleus	13.75	13.32
GSMUA_Achr7P23570_001	Banana	nucleus	11.49	13.3
GSMUA_Achr6P18450_001	Banana	nucleus	11.16	13.09
EES06976	Sorghum	nucleus	11.16	13.09
GSMUA_Achr6P03270_001	Banana	nucleus	8.74	13.01
GSMUA_Achr6P24150_001	Banana	nucleus	9.22	12.58
TraesCS3A01G404700.2	Wheat	nucleus	11.65	12.57
EES03998	Sorghum	nucleus	11.49	12.52
TraesCS3B01G438400.1	Wheat	nucleus	11.49	12.43
Os01t0885300-01	Rice	nucleus	11.49	12.39
Zm00001d016849_P002	Maize	nucleus	11.0	12.21
TraesCS3D01G400000.1	Wheat	nucleus	11.16	12.08
Os12t0273700-01	Rice	nucleus	7.77	11.97
CDY46409	Canola	nucleus	4.85	11.41
TraesCS6B01G192000.1	Wheat	nucleus	10.19	11.39
TraesCS6D01G153200.1	Wheat	nucleus	10.19	11.39
TraesCS6A01G159300.1	Wheat	nucleus	9.87	11.03
CDY38790	Canola	nucleus	2.43	10.79
HORVU1Hr1G063930.1	Barley	nucleus	12.46	10.55
Zm00001d042598_P003	Maize	mitochondrion	10.84	10.42
TraesCS1D01G263300.1	Wheat	nucleus	12.3	10.4
TraesCS1A01G263200.1	Wheat	nucleus	12.14	10.27
Os05t0420500-01	Rice	nucleus	11.81	10.27
Os02t0558600-01	Rice	nucleus	9.71	10.12
HORVU6Hr1G033310.33	Barley	cytosol	9.55	9.85
TraesCS1B01G273800.1	Wheat	nucleus	11.65	9.85
EES18249	Sorghum	nucleus	11.81	9.52
TraesCS2A01G089100.1	Wheat	nucleus	5.02	9.39
Zm00001d038217_P002	Maize	nucleus	11.0	9.02
HORVU2Hr1G014550.1	Barley	cytosol	5.18	5.83

Protein Annotations

EMBL:ACUP02007144	EnsemblPlants:KRH31410	EnsemblPlantsGene:GLYMA_11G246500	EntrezGene:102668424	PANTHER:PTHR31358	PANTHER:PTHR31358:SF12
ProteinID:KRH31410	ProteinID:KRH31410.1	SEG:seg	UniParc:UPI0002948F14	UniProt:K7LS20	MapMan:35.2

Description

hypothetical protein

Coordinates

chr11:-:33966168..33970190

Molecular Weight (calculated)

67241.3 Da

IEP (calculated)

10.154

GRAVY (calculated)

-0.844

Length

618 amino acids

Sequence
(BLAST)

001: MAESSACLVR SFSSPAETTC YEGNPILALG ESISFGRFMT ESLDWEKWST FSHNRYVEEA EKYSKPGSVA AKKAYFEAHY KRKAAERAAA VIQEANAQAN
101: GTFEAQVHEG NCADSSSETS SNVENTVAAN EQPDNETVNY QVVECADRDQ HKCDARQSDL DISNVEGAED VPRHHTATDL NVESCRFVDN SNSNQLYLVE
201: DNTDIAVPAE EMTLDHVPVD QEVLALPVKG REVNSSPKLS TKTGVANHSR SFDERKAAVP PRSGINSGPM GKKSVGGLVE KKRLTAQSVH MSINLPSGTG
301: ETRKRTAAAS QSRNGLNNFS TSKKSVGGLV EKKRITAPSL YMSINLPSGA GITSKTATVV TKPRNGINFA AKSLKSVGDS VEKGPTKRSL HMSINLPSGA
401: GETSKTASVL EQNRIKKNHS NIPKNNPGAL RTSTKVSHGL LNQASANPPS RDRSCLKSSS PTKSNPQSAT ISAPFRFRSE ERAVKRKEFL QRMDETKSKE
501: EEKVKLQRTL KGKTEHDHKK LQQSSGSISK LNEDKPGESQ SPSNQTRKIS LTLPRSPKLG RKASSSSSTV QDKSLGNSWK PPISTSKRTT EKNNRTTRQS
601: VTLLSNNTRE NASPNIQQ

Best Arabidopsis Sequence Match ( AT3G27350.1 )
(BLAST)

001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE

Arabidopsis Description

Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.