Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G263200.1 | Wheat | nucleus | 96.44 | 96.58 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 93.98 | 94.11 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 93.57 | 93.57 |
| Os05t0420500-01 | Rice | nucleus | 44.6 | 45.85 |
| EES18249 | Sorghum | nucleus | 41.31 | 39.37 |
| Zm00001d038217_P002 | Maize | nucleus | 39.95 | 38.73 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 29.96 | 38.35 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 16.96 | 23.22 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 15.46 | 21.44 |
| KRH33693 | Soybean | nucleus | 6.02 | 20.66 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 11.63 | 16.28 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 11.9 | 15.73 |
| PGSC0003DMT400032926 | Potato | nucleus | 10.81 | 15.46 |
| KRH16191 | Soybean | nucleus | 7.8 | 15.41 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.53 | 15.37 |
| PGSC0003DMT400017939 | Potato | nucleus | 10.4 | 15.32 |
| KRG99370 | Soybean | nucleus | 5.06 | 15.29 |
| Solyc02g067950.2.1 | Tomato | extracellular | 10.26 | 15.12 |
| KRH45764 | Soybean | nucleus | 9.3 | 14.11 |
| KRH07049 | Soybean | nucleus | 9.58 | 14.03 |
| KRH57609 | Soybean | nucleus | 11.9 | 13.99 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.21 | 13.33 |
| KRG99221 | Soybean | nucleus | 8.62 | 13.21 |
| KRH69438 | Soybean | nucleus | 8.62 | 12.55 |
| KRG94005 | Soybean | nucleus | 11.22 | 12.46 |
| PGSC0003DMT400031254 | Potato | nucleus | 10.94 | 12.4 |
| KRG97481 | Soybean | nucleus | 11.08 | 12.39 |
| KRH31410 | Soybean | nucleus | 10.4 | 12.3 |
| PGSC0003DMT400058225 | Potato | nucleus | 9.99 | 12.25 |
| KRH74704 | Soybean | nucleus | 9.03 | 12.15 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 7.93 | 12.01 |
| Solyc05g006490.2.1 | Tomato | nucleus | 9.58 | 11.63 |
| Solyc05g014270.2.1 | Tomato | nucleus | 9.71 | 10.66 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.65 | 9.09 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G263300.1 | EnsemblPlantsGene:TraesCS1D01G263300 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF7 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1D:+:357449455..357455065
Molecular Weight (calculated)
79559.0 Da
IEP (calculated)
11.003
GRAVY (calculated)
-0.889
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQNCF AWPHEESSGQ GSSQGTTQVF DHGSISFGRF DLESLAWEKW SVFTNDRRTE EFVKFNGLVA KKKAYFEEYF KRIRELKALE QQNQQTELNL
101: EYSGDGSDSS QTGEDEPVAK HASPTGSGTH VDDSIGQIAA ETTPEHQLGC YKDHNESISN GISTMTRSSS VGGLQIIGEE TGENASSDKQ NAKCGQDDLV
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTSSYNPDH TFVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERRPVTRDG SRNPAGMASS CRPSTAERRL ATRDLAANQT NIASPCRPST AERRAITKEL APKHANVATP RRPSTADRRP ITKEPAPNNA
401: NIATPRRPST HDRRLTTKEP AAPKHANIAT PQRPSTAERR PARREMAPKL AGIASPCWPS SAERRPVARG IAEKNADVVT LRRPSTAERR PIKREAAPKH
501: ADVVPLRRPS TAERRPVTRD TGLKHANVGN PCCPSTPERC LSRGNAAKHA DVVITPCRPS TGERRAIAKE NTLKLDPKTP IRLRAMPGDS NGAMATAATP
601: QKAITRNLVK TSKPEMKSYA KERLELQVGG KLKSSSVNLP PRKVLTSNVG ANRVVENIRK PNKQGIQETV GSRVFASKNA TPLQTGSAKT RVPNPPPPPP
701: PRRASQSPSK PSPNKLSVGG RKPKASTPHW H
101: EYSGDGSDSS QTGEDEPVAK HASPTGSGTH VDDSIGQIAA ETTPEHQLGC YKDHNESISN GISTMTRSSS VGGLQIIGEE TGENASSDKQ NAKCGQDDLV
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTSSYNPDH TFVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERRPVTRDG SRNPAGMASS CRPSTAERRL ATRDLAANQT NIASPCRPST AERRAITKEL APKHANVATP RRPSTADRRP ITKEPAPNNA
401: NIATPRRPST HDRRLTTKEP AAPKHANIAT PQRPSTAERR PARREMAPKL AGIASPCWPS SAERRPVARG IAEKNADVVT LRRPSTAERR PIKREAAPKH
501: ADVVPLRRPS TAERRPVTRD TGLKHANVGN PCCPSTPERC LSRGNAAKHA DVVITPCRPS TGERRAIAKE NTLKLDPKTP IRLRAMPGDS NGAMATAATP
601: QKAITRNLVK TSKPEMKSYA KERLELQVGG KLKSSSVNLP PRKVLTSNVG ANRVVENIRK PNKQGIQETV GSRVFASKNA TPLQTGSAKT RVPNPPPPPP
701: PRRASQSPSK PSPNKLSVGG RKPKASTPHW H
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.